Gene Paes_0256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0256 
Symbol 
ID6460337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp264203 
End bp264844 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content53% 
IMG OID642724247 
Productphosphoheptose isomerase 
Protein accessionYP_002014960 
Protein GI194333100 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0279] Phosphoheptose isomerase 
TIGRFAM ID[TIGR00441] phosphoheptose isomerase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.245661 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGTCAA CGGGGCCCGG GAATATGCCT GACGATTCGC TGGAGGGATT GGTCCGGTCT 
ATGCTGCATG AGAGTGCGCG CATTCAGATG CAGGTTGCAG ATGATCAGAG CGGGCGCATT
GTCGAGATGG CCGCTTTAGT CAGCAGCGTT TTCGAGAAAG GGGGTAAACT GCTGTTGTGT
GGTAACGGAG GAAGTGCAGC CGATGCGCAG CATCTTGCTA CTGAACTGAC CATTCGTTAT
CGTAAGAGCG TTCAGCGCAG GGCGCTTCCG GCCATTGCGC TGACGACGGA TACCTCTGCC
CTGACAGCCG GAGCAAACGA CCTGGGTTAC GATGATGTTT TTTGCAGGCT GGTTGAGGCA
TACGGCCGGC AAGACGATAT TCTTCTGGGT TTGTCGACGA GCGGCAATAG TGAGAATGTC
TTTCGTGCAA TCAACTTTGC ACGCGAGCAG GGGATGCATA CACTTGCTTT TCTTGGCGGT
GACGGGGGAC GTATTCTGCA GGTCGCCGAT ATGTCCATCG TTGTGCCCTA TGATAAGGCG
GCTGACAGAG TGCAGGAGTG CCATATAGCT GTCGGCCACT GTCTGATTGA TTGTGTTGAG
AGACTGATGG GGTTCTGTTC GGAAAAACAT ATAACCGTAT AA
 
Protein sequence
MMSTGPGNMP DDSLEGLVRS MLHESARIQM QVADDQSGRI VEMAALVSSV FEKGGKLLLC 
GNGGSAADAQ HLATELTIRY RKSVQRRALP AIALTTDTSA LTAGANDLGY DDVFCRLVEA
YGRQDDILLG LSTSGNSENV FRAINFAREQ GMHTLAFLGG DGGRILQVAD MSIVVPYDKA
ADRVQECHIA VGHCLIDCVE RLMGFCSEKH ITV