Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_0254 |
Symbol | |
ID | 6460593 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | - |
Start bp | 263153 |
End bp | 264019 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642724245 |
Product | UspA domain protein |
Protein accession | YP_002014958 |
Protein GI | 194333098 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.422805 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAAAA TCCTGGTCCC GACGGATTTC TCTCCCCAGG CAGCCAATGC GCTGGGCGTA GCGCTGAGCA TTGCCCGTAC AAGCGGCGCA GAACTGCATA TCTACCATGT CATCGAATCA CCTGACTATC CTGAAATAAC CGATATCATG GCCTATCAGT CGCTTGGCAA TACCAATGTG CTTGAAAAAA TCGAGGAACG TCTCGCCCAG ATAACCGATT GTGAAGAGTG CGCCGATATC AGAATCTCCT ACTCGATCGA TTTCGATTCC CCCTATGAAA AAATCTCCCA TAAAGCCTCA GAGGAAAACT ACGATCTGAT CGTCATCGGC TCTCATGGCA GAAAAGGGAT TGACCGCCTC CTTATCGGAT CGACAACGGA GAAAGTCATC CAGCACGCAC CATGCCTCGT ATTGACCATC AAGGATGCAA CCAGTTACTT TTCTCCGTCA AATATCGTCT TCGGCTCGAA CTTCTACGGG GAAATCGCCA GTGGATTCTC CTGTCTTCGA AAATTCGCGG ACCTCTATGA AGCCACCATC CACCTGCTCA AAATCAATAC CCGGAGCCAC TTCGAAACAA GCCGCTACAG CCGACAGCTG ATGGAAAAAT TTGCTGAAGA ACAGCAGTTA TCCAACTACA CCATCAACAT CTTCAACGAC GACAGCGAAG AAGAGGGAAT TCTTCACTTC GCAAGAGACA CCGAAGCCGA TATGATCTGC GTTCCAACCC ACGGCAAAAC AGGCCTCTCC CACCTGATCT CGGGAAGCAT CGCAGAAAGC GTTTCGGAAC AGGCCTTCAG GCCGGTCCTG ACCTACAGGA TACAACCGGC CACCATAAAA TACGGCGTTA TCGCCCCATT CAGTTGA
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Protein sequence | MNKILVPTDF SPQAANALGV ALSIARTSGA ELHIYHVIES PDYPEITDIM AYQSLGNTNV LEKIEERLAQ ITDCEECADI RISYSIDFDS PYEKISHKAS EENYDLIVIG SHGRKGIDRL LIGSTTEKVI QHAPCLVLTI KDATSYFSPS NIVFGSNFYG EIASGFSCLR KFADLYEATI HLLKINTRSH FETSRYSRQL MEKFAEEQQL SNYTINIFND DSEEEGILHF ARDTEADMIC VPTHGKTGLS HLISGSIAES VSEQAFRPVL TYRIQPATIK YGVIAPFS
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