Gene Paes_0225 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0225 
Symbol 
ID6459699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp234548 
End bp235891 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content52% 
IMG OID642724216 
Productpentapeptide repeat protein 
Protein accessionYP_002014929 
Protein GI194333069 
COG category[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA TTCTTCTTCC TGCAACAATA GTCATGCTTT GCCAGTTTGG CCCCGCCTCT 
GTAAACGGGT ATTGCGCCAA CCAGGCACAG GTCAACCAGT TACGCTCCGA TGTCGCGACA
TGGAACAGCT TGCGCAGTAA GGGCTCCGAA CCGGTCATAG ACCTCAATTA TGCAAAACTG
AACGATGCCA ACCTCAACGA TGCGGATCTG CACGATGCGT CGATGATCAA AGCCGGGCTC
AACGGAGCCG CTATCAACCG CTCAAATCTG AAGAACGCAA ACCTTTATCT GGCAAAGCTC
AAACGCGCAA ACATCAAAGA TGCCTCTCTC GAAGGAGCAA ATCTCGTAAA AACGGATATG
AGAAGCGCCT GCATGTCGCG CACAAACCTA CGATCGGCAA ATCTTGCCAT GGCCGACTTG
CGCTGGGTCA TTCTCGATGA GGTGAACCTC AATAGCGCGT TCCTGGAAAA AGCGAAACTG
TTCGGGGCAA CACTCAAAAG TGCAGACCTG AGAGGTGCTA ATCTGAAAGG AGTAGAAATG
CTCGGACAAG CCAACCTCAC AGGAGCAAAG GTTTCCGTAA ATACTATTTT GCCAAATGGG
AAGCGCGCAA CATCGCTCTG GGCATCCATA CACGGAGCCC GATTCATCAA AGAACCCGAA
ACTCCGGCTG TTGTCATGGA CTACTCAGAG ATCAGCCTTC CTGAAATAAA CACGGTCGGA
ATTCCAGAAA AACCGAACGA TTCCACCACT CCCGGCCCCC CTGCACTCAA GCCGCAAATC
ATACTGGAGC AGGATGTTCA GGCATGGAAT GCCATGCGCA CGCAGCAACC GGAACTCAAG
CCGGACATGG AAGAAGAAGA CCTCAGCGAT GCCCGCCTTG AGGGAGCCGA CCTGAAAGCC
CTTGCAATGA ACAATGCGAC AATGGACGGA GCCGATATGG ATAGTGCGGA CTTTTCAGGC
TCCCAGCTTG CAAACACCTC ATGGAAAAGA GCTGATCTGA AAAACGCAAA CTTCCAGAAC
GCCGATCTGA CAGGCGCAAA CTTCGAAAAT GCCTTCATGA GAGGAGCAAA TCTCTCGAAC
GCCAATCTCA CAGGAGCGCG TTTCTATGGA ACAAGGGTTC AGGACGCCAA CATGCAGAAT
GCCGATATGC AGAAGGTCAA TCTCTTCAAC GCCGATCTGA CAGGCGCCAA CCTCTGCGGA
GCCAATCTGA AAAACGCACA GCTTATGGAT ACCATCCTCA ACGGGGCACA CATCTCAACA
TCGACAATCA CCCCTTCGGG AAAACCCGCC ACACGAAGCT GGGCTGTACT TCGTGGGGCT
CGATTCACTG ACAACAAAGA GTAA
 
Protein sequence
MKKILLPATI VMLCQFGPAS VNGYCANQAQ VNQLRSDVAT WNSLRSKGSE PVIDLNYAKL 
NDANLNDADL HDASMIKAGL NGAAINRSNL KNANLYLAKL KRANIKDASL EGANLVKTDM
RSACMSRTNL RSANLAMADL RWVILDEVNL NSAFLEKAKL FGATLKSADL RGANLKGVEM
LGQANLTGAK VSVNTILPNG KRATSLWASI HGARFIKEPE TPAVVMDYSE ISLPEINTVG
IPEKPNDSTT PGPPALKPQI ILEQDVQAWN AMRTQQPELK PDMEEEDLSD ARLEGADLKA
LAMNNATMDG ADMDSADFSG SQLANTSWKR ADLKNANFQN ADLTGANFEN AFMRGANLSN
ANLTGARFYG TRVQDANMQN ADMQKVNLFN ADLTGANLCG ANLKNAQLMD TILNGAHIST
STITPSGKPA TRSWAVLRGA RFTDNKE