| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_0204 |
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| Symbol | |
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| ID | 6460536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | + |
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| Start bp | 212411 |
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| End bp | 213493 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642724196 |
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| Product | TIR protein |
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| Protein accession | YP_002014909 |
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| Protein GI | 194333049 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02145] Fibrobacter succinogenes major paralogous domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00447425 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGATA TCTTTATCAG CTACGCACGA GAAGACCTGA AACGGATCAA GCTACTGGTC
GAGGCACTAA CAAAGCAGGG ATGGAGTGTG TTCTGGGACC GTAGGATTCG TGCAGGGCAA
AAGTTTTCAT CAGTCATAGA AAACGAGCTC CAGAATGCTC AATGTGCCAT TGTTGCCTGG
TCGGAACATT CAGTGAATTC TGATTGGGTG CACGATGAGG CAACCGAAGC CAAAGAACGA
AATATTCTTG TGCCGGTTCT TCTGGATGTC ATTAAACCGC CAATGGGATT TCGGAGGATC
CATGCTGCCG ATTTAACGGT ATTTGGTACC GGAAAACGTG ATTCGGTACT GGAACAGCTA
TTTGAGGATA TACGTGAAAT CGTTGGAGAG CCATCACGGC TACATCGTGA TGTTGAAGAG
CCGATAAAGA GAAAACCAGA AGAAAGGATG GAGCCCTTTG ACCTTGTTGA TGTCGATGGC
GCAACCTATA AAACCATACA GATCGGTAAG CAGGTCTGGA TGGCGGAAAA TCTTGATGTG
AGTCGTTACA GGAATGGCGA TGCAATTCCG CGGGTGCAGG ATCCGGAAAA ATGGGCAGAA
CTCACCACTG GAGCCTGGTG TTACTACGAC AACGATACCG GAAACGGCAG GGTGTATGGG
AAACTGTACA ACTGGTATGC GGTGAACGAC CCGCGGGGTC TTGCCCCTGA AGGATGGCAT
GTGCCGTCAG ACAAGGAATG GCAGGAACTC GAACGTTTTC TCGGGATGAG CCGGTATGAT
GCCGAAAAAA CAGGTTTGCG CGGTTCGATC GGGGGCAAGC TGAAAGAAGC TGGTTCTCTA
CACTGGAGAG AGCCGAACGC AGGAGCCACA AACGAAACCG GGTTTACAGC GCTGGCCGGC
GGCTATCGTT ACTACAATGG TGGGTTCTTC TACATTGGAG GTTACGCGTC GTTCTGGTCG
TCGTCTGCCT ACGGTGATGC GATCGCATGG AACCGCAAGC TCAGCTACCT TGGTACGGAA
GTCTACCGTG ACCTCAGCAA TAGGAGGGTA GGTATGTCCG TTCGTTGCGT CCGGGATGAT
TGA
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| Protein sequence | MADIFISYAR EDLKRIKLLV EALTKQGWSV FWDRRIRAGQ KFSSVIENEL QNAQCAIVAW
SEHSVNSDWV HDEATEAKER NILVPVLLDV IKPPMGFRRI HAADLTVFGT GKRDSVLEQL
FEDIREIVGE PSRLHRDVEE PIKRKPEERM EPFDLVDVDG ATYKTIQIGK QVWMAENLDV
SRYRNGDAIP RVQDPEKWAE LTTGAWCYYD NDTGNGRVYG KLYNWYAVND PRGLAPEGWH
VPSDKEWQEL ERFLGMSRYD AEKTGLRGSI GGKLKEAGSL HWREPNAGAT NETGFTALAG
GYRYYNGGFF YIGGYASFWS SSAYGDAIAW NRKLSYLGTE VYRDLSNRRV GMSVRCVRDD
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