Gene Paes_0187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0187 
Symbol 
ID6460238 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp194229 
End bp195038 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content50% 
IMG OID642724180 
ProductABC-3 protein 
Protein accessionYP_002014893 
Protein GI194333033 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGAGA TCCTTCAGTA CGAGTTTATG CGCAATGCTA TTCTGGCAGC TCTCTTTTCC 
AGTATAGCCT GTGGTATTAT CGGCAGTTAT GTGGTTGTCA ATAAGATAGG TTTTATCAGT
GGAGGTATCG CCCATGCCGC TTTTGGAGGT ATAGGTCTTG GGTACTATCT CGGCATCAAT
CCACTGTTCG GGCTTGTGCC GTTCAGCTTG CTCTCGGCCA TGGGTATCGG GTTGCTGAGC
AGGAAAGCCA ATGTGTCGGA AGATACGGCG ATCGGTGCGT TCTGGGCGGC AGGAATGGCT
ATCGGGGTTA TTTTTATCGG ATTGACTCCC GGCTATGCTC CAAATCTGTT CAGCTACCTG
TTTGGCAATA TTCTGACCGT TCCCTCGTCT GATCTTCTGA TGATCCTTGC TCTTGATGTC
GTCATCGTCG TGTCGGTTTT TCTGCTGTTC AAGGAGTTTC TCGCTCTTTC CTTCGATGAA
GAGTATGCGG AAGTGTCGGG GGTAAAAACG ACGCTGGTCT ATCTGCTGCT GCTCGGTCTG
ATTGCGCTGA CGGTTGTCAT TCTCGTGCGG ATCGTGGGTA TTGTTATGGT CATTGCTCTA
CTGACGATCC CGGCTGCTAT TGCCCGGCGC TTCAGCAGGA ATCTTCTGTC CATGATGGTG
CTTGCCTCTT TGTTTTCTGC GCTTTTCTGC CTCGGAGGTT TATGGATATC CTATCTTCTC
GACATTGCTT CAGGGGCTTC GATTATCCTG ATTGCGGCAG CAGTTTTTCT TGCTGTGCAT
CTGTTTAAAG GCGAAGCCGG ATCTCGTTGA
 
Protein sequence
MPEILQYEFM RNAILAALFS SIACGIIGSY VVVNKIGFIS GGIAHAAFGG IGLGYYLGIN 
PLFGLVPFSL LSAMGIGLLS RKANVSEDTA IGAFWAAGMA IGVIFIGLTP GYAPNLFSYL
FGNILTVPSS DLLMILALDV VIVVSVFLLF KEFLALSFDE EYAEVSGVKT TLVYLLLLGL
IALTVVILVR IVGIVMVIAL LTIPAAIARR FSRNLLSMMV LASLFSALFC LGGLWISYLL
DIASGASIIL IAAAVFLAVH LFKGEAGSR