| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_0130 |
|---|
| Symbol | |
|---|
| ID | 6460440 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prosthecochloris aestuarii DSM 271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011059 |
|---|
| Strand | + |
|---|
| Start bp | 136439 |
|---|
| End bp | 137362 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642724118 |
|---|
| Product | peptidase C1A papain |
|---|
| Protein accession | YP_002014837 |
|---|
| Protein GI | 194332977 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG4870] Cysteine protease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.594883 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTCCCC AGAAAATTCG TATCGAGCCA TCAACATCAT CACCTTTTCT CGGTACCGGA
TGGCTTCCGC CAATGCCGGA TCTGCGCGAT TACACCGCCG AGACGCCGGC TATTGTCGAT
ATGGTGAAAA AACTCAAGTT CAAATCGGGG GCGAAGTCCT CGAAAAGTGC AATTCCGGTT
TCAGTGGACT TGCGCGAGTG GTGCTCGCCC ATCGAGCATC AGGGTGAAAT CGGCGCATGC
ACTGCTCATG CCGTCCTTGG CGTTGTCGAG TATTTTCAGC GACGTGCCTA CGGCGAGCAT
ATAGATGGAT CACGTCGTTT TGTCTACAAG ACGACCCGTA ATCTTATGGG GGTTACGGGC
GATACCGGTG GATGGCTGAG AAATGCTATG GGTGCGCTGG CGGTTTGCGG GGTTCCGCAT
GAGAAATACT GGGAGTATAC GGATGCCGAC CCGGAATATG ATGAAGAGCC GCCTGCCTTT
GTTTATGCGG TCGCCGATAA TTTTGAGGCG TTGAAATATT TCTGTCACGA TCCTCTCGGG
TCGAATATCA AGCGCGACGA GGTGCTGAAA AGCGTCAAGA AGTTTCTGGT TGCCGGGGTT
CCCTCTCTGT TGGGTTTCTA TGGTTTTCCC TCGTTTGGTT CGGGAAAGGA AAAAGGCGAT
ATCCCGTTTC CCGGCAATTC CGAGAAGGCG GAGTGGGGCC ATGCGATCGT TGCTGTGGGC
TACGATGATA AGAAGGAAGT GACTAATACG ACAGGTACAT CGACGAAAAA AGGGGCTCTG
CTGATTCGTA ACTCATGGGG CGAAGAGTGG GGCTCCGAAG GCTATGGGTG GTTACCTTAC
GAATATGTTC TGCAGGGGCT TGCCGTCGAT TTCTGGTCAC TCCTGAGCAT GGAGTGGGTC
GATACCCGTC AGTTCGGTTT TTAG
|
|---|
| Protein sequence | MLPQKIRIEP STSSPFLGTG WLPPMPDLRD YTAETPAIVD MVKKLKFKSG AKSSKSAIPV
SVDLREWCSP IEHQGEIGAC TAHAVLGVVE YFQRRAYGEH IDGSRRFVYK TTRNLMGVTG
DTGGWLRNAM GALAVCGVPH EKYWEYTDAD PEYDEEPPAF VYAVADNFEA LKYFCHDPLG
SNIKRDEVLK SVKKFLVAGV PSLLGFYGFP SFGSGKEKGD IPFPGNSEKA EWGHAIVAVG
YDDKKEVTNT TGTSTKKGAL LIRNSWGEEW GSEGYGWLPY EYVLQGLAVD FWSLLSMEWV
DTRQFGF
|
|---|
| |