Gene Paes_0105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0105 
Symbol 
ID6458545 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp105571 
End bp106518 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content53% 
IMG OID642724092 
ProductCache type 2 domain protein 
Protein accessionYP_002014812 
Protein GI194332952 
COG category[T] Signal transduction mechanisms 
COG ID[COG4564] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATGA GCGATCAATA TAACGTTCAC CGGCGAGTAT TGCCGCCTTT CGCCACCCGG 
CTTCTTTTCA TTCTGCTTCT GCAACTGACC GCAGGGTGCG CGAGCCGTTT TGACGATCTT
GACCTGTCGG CCTACCAATA TCGCGATACC CGGAATCTGG TGACGTTTGT CTACGATGCC
AGGCATATCC TCGAACAGGA AGGGCTGAGC GCCCTCGATT ATTTTCGTGC CAATGACGAC
CACTATGCGA CAGAGGAACA CTATCTCTAT ATCTACGATC TTCAGGCCAA TAATCTCTAC
CATGCAGGGA TGCCTTCTCT GGAAGGCCGA AACCTGCTCG ATGTGACCGA TATCAACGGG
AAACAGATTT CGCGTCTGAT TCTCGAAGCC CTTGATGACC CTGAAAATCC TCATGGGTGG
GTGCATTACT CATGGTGGGC GCCGGGGAGC TTCTACCCTG TACCCAAATC ATCCTGTCAT
TTCAGGGTGA CTACTCCTGA TGGAAAGGAG CTGTTTGTCG GGGCAGGTAT GGACTATCCT
CACGAAGAAA AAGAGTTTAT TCGTATTGTC GTTGACGGGG CGGATAGGCT GGTGCGCCAA
AAAGGCAGGG AGGCTATCGC CATCATGTCG GATCCGCTGT CGTCGTACAA CTATCGGGAT
GTGCGCGTTT TTGCATTTCA TCCCGACGGA GAACTCCTGA TATCGCCTGT GGTGCAGGAC
AGTCTTCTGC AGATCCGTCT GTTCGAGTGC GCCGACGAGG TGGGGCACCA TCCGTTTGCT
AACGCCGTCA AGCGTCTCGC ATCGCAGGAC AGGGTGTGGG AGGTGTTTAT GGTGAAGAAT
CGATACCAGC GCGGGCTGGT GAAAAAATGT ATGTATCTGC GCAAATCGGA GATGTCGGGC
CGGACGCTCT ATATCGGAGC GATTACCGAT CTGCCGCAGC CACCGTAG
 
Protein sequence
MTMSDQYNVH RRVLPPFATR LLFILLLQLT AGCASRFDDL DLSAYQYRDT RNLVTFVYDA 
RHILEQEGLS ALDYFRANDD HYATEEHYLY IYDLQANNLY HAGMPSLEGR NLLDVTDING
KQISRLILEA LDDPENPHGW VHYSWWAPGS FYPVPKSSCH FRVTTPDGKE LFVGAGMDYP
HEEKEFIRIV VDGADRLVRQ KGREAIAIMS DPLSSYNYRD VRVFAFHPDG ELLISPVVQD
SLLQIRLFEC ADEVGHHPFA NAVKRLASQD RVWEVFMVKN RYQRGLVKKC MYLRKSEMSG
RTLYIGAITD LPQPP