| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MARTH_orf436 |
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| Symbol | rpsC |
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| ID | 6418437 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycoplasma arthritidis 158L3-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011025 |
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| Strand | - |
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| Start bp | 378872 |
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| End bp | 379615 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 4 |
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| GC content | 33% |
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| IMG OID | 642715559 |
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| Product | 30S ribosomal protein S3 |
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| Protein accession | YP_001999997 |
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| Protein GI | 193216755 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0092] Ribosomal protein S3 |
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| TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 72 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGTCAAA AAGTTAATCC AAATGGTTTT CGCTACGGCA TTACCAAAGC GCATAACAGT
GTTTGATATG CTGATAAAAT GCAATTTGCT TCTCACTTAT TAGAAGATCA AAAAATTTAT
GATTTCTTTG ATAAAAAAGT GCGTCAACTA CAAATTGGTA ACGTTCAAAT TAAAAGAAAT
CAAAATGGTT TAATTCTAAT TTATGTTTAC ACCGCTAAAC CCGCAGTTAT GTTGGGAACA
AATGGTGAAA ACATTAAAAA CCTAACCAAA GATCTTCAAA AAATCTTAAA AAATAAAAAA
GCAAACATTT CAATTCAAGT TATTGAACTT AAAAAACCTG ATTTAAATGC TCGTCTTCTA
GCTGAAGATA TTGCCATTAA ATTAGAAAAC CGGGGCAGTT TTAGATTAGC ACAAAAATTT
GCTATTAAAG CTGCTTTAAA AGCCGGAGCT AAAGGAATTA AAACTTCAGT TTCAGGCCGT
CTAAATGGTG TTGATATGGC TAGAACCGAA GGATATAACG AAGGTGAAAT GAAATTGCAT
ACCCTAAGAC AAGATGTTGA TTATGCTGCT ACTACAGCAA AAACAACTTA CGGAATTCTA
GGGGTAAAAG TGTGAGTTTC ATTAGGTGAA ATTCTTAGCG ATGAACAAAA AGCTAAGCAA
GAAGAAATGG ACCTACTAAA CGCACCAAAA GATAGAAGAG TAAGAAGGGG CGGTGAAAGA
CATGCTTCAA CCAAAAAGAA CTAA
|
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| Protein sequence | MGQKVNPNGF RYGITKAHNS VWYADKMQFA SHLLEDQKIY DFFDKKVRQL QIGNVQIKRN
QNGLILIYVY TAKPAVMLGT NGENIKNLTK DLQKILKNKK ANISIQVIEL KKPDLNARLL
AEDIAIKLEN RGSFRLAQKF AIKAALKAGA KGIKTSVSGR LNGVDMARTE GYNEGEMKLH
TLRQDVDYAA TTAKTTYGIL GVKVWVSLGE ILSDEQKAKQ EEMDLLNAPK DRRVRRGGER
HASTKKN
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