Gene MARTH_orf298 details

Gene Information

• Locus tag: MARTH_orf298
• Symbol: topA
• ID: 6418146
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Mycoplasma arthritidis 158L3-1
• Kingdom: Bacteria
• Replicon accession: NC_011025
• Strand: +
• Start bp: 268157
• End bp: 270019
• Gene Length: 1863 bp
• Protein Length: 620 aa
• Translation table: 4
• GC content: 33%
• IMG OID: 642715455
• Product: DNA topoisomerase I
• Protein accession: YP_001999894
• Protein GI: 193216652
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0550] Topoisomerase IA
• TIGRFAM ID: [TIGR01051] DNA topoisomerase I, bacterial

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 0.504202
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATCAGA AAGTTTTAAT AGTTGAATCA CCAAATAAAG TAAAAACTAT TCAGCAATAT 
GTTGGTAGCG ATTACAACGT TGTTTCTTCG GTTGGTCATA TTCTTAAATT AAGCACATCA 
GGCGTTGATG GGCTTGGTAT TGATTTTACT AATTGAGAGC CCATGATGAT TCAAGATCGT 
ACTAAAGCTA AAGTTATTAA AGCTCTTAAA GATGCTACTA AAAATGCTAA AGAAGTTTTA 
ATTGCAACTG ACCCGGACCG CGAAGGTGAA GCAATAGCGC AAAACTTAGT TGATACTCTA 
AAATTAAGTA AGATTTACCG CCGCATTAAA TACAATGAAA TTACTGCTGA AGCAATCAAA 
GAAGCACTAG AAAATCCCCA AATGATTGAC GATAATTTAG TAAAAGCCCA AAAAACTAGA 
AGAATGTTAG ATCGAATTAT TGGTTTTAGG CTTTCGCAAC TAATGAAAAG AAAAGTTAAA 
AATGCTCCAT CACTACCATC AGCTGGAAGA GTGCAATCAA TTGCTCTAAA ACTAGTGTGC 
GATAAAGAAA AAGAAATAAA GGCTTTTATT CCTATTAAGT ACAATAAAAT TCAGGCAAAG 
ATTTCCGAAG ATGTTATCGC TGATTTTTAC TATCCAACAA ACTCAGATTT TAAAAATGAT 
AATACTTGAA TTTTGCCTGA AAAAATTGAT AGTATTGTTG CTGAATTAAA CAAAAATAAA 
AGTTTATTAG TTAAAGACTT TAAAGTTTCA CAACGAAAAG AATCACAAAT TACGCCTTTT 
AAACAATCGG TTTTATATAA AGAAGCAAAA TATTCAGCTA CGACTGTGCA AATTAGTGCT 
CAAAAGCTTT TTGAGATGGG GCTAATTTCA TATCCAAGAA CAGACTCAAC ACGAATGAGT 
GATACCTTTA TTGCAAAAGC GCGTGAATAC ATCAAAGAAA AATTTGGCGA AAATTATGTC 
GCTAGTGATA TTAAAAGTTT TTCAGGTGCT CAAGACGCTC ACGAAGCGAT TCGTCCTACA 
GATATTTATT TAATACCGCA AGTTGCTAAG ACAAAATATG ACTTAGGTGA GGTTGAATCT 
TATATTTATA CAATCATCTA CAACAAAACT ATGTCGTCAT TAATGACTCC ACCAGTTAGA 
GAAATTTATC GCTATGAATT GGTCAATGGG CTTTATTACT TTAAAATGTC ATACAGTAAA 
GTTATTTTTG ATGGGTATTA TCGTGTTCTT AATTTTGAAG AGCCCAAGCC ACTTCCGAAA 
TACGAAATTG GTGAAGCAAT TCCTGTTCTA GAATTTACAA GGTTTGATAA AGAAACTCAA 
CCACCTGCGC GTTACAATGA AGGTTCACTT ATTAAAATGC TAGACGATAT AAAAGTTGGT 
CGTCCTTCAA CATTTGCTTC AACGATCAAT ATCATCAAGA AACGTTTATT TGTTGAAACA 
ATTAACGGTG CCTTACATCC CACAGTTTTT GGCGAAGTAG TTTTAAAAAA ACTAATTGAA 
GGTTTTCCAA ATACAATAAC AGAAGAATAC ACTGCTCAGG TTGAAGAAGA ATTAGACGAA 
GTTTCCGAAG GCAAAGCTGA CTATAAAATT TTATTAGAAG ACTTTTGAAA TCGTTTCCAA 
CGTAGTTATG ATGATGCTTC AAAAACAATC GAAATAAGCA TTATGCCCCA AGAGTTTTTA 
GAGCGTAGTT GCCCAAGATG TGGATCAACT CTTTTGTATC GCAACAATAG CAAAAAACAC 
ACCAAATTCA TTGGTTGTAG TAACTTTCCA GCTTGTCGTT ACTCTGAGAA TGCCGATGGC 
ACTCCTACAG GACAAAAAAC TTACAAACCT CGTTACTACA AAAAATCTTC AAAAGCTAAT 
TAA 

 

Protein sequence

MDQKVLIVES PNKVKTIQQY VGSDYNVVSS VGHILKLSTS GVDGLGIDFT NWEPMMIQDR 
TKAKVIKALK DATKNAKEVL IATDPDREGE AIAQNLVDTL KLSKIYRRIK YNEITAEAIK 
EALENPQMID DNLVKAQKTR RMLDRIIGFR LSQLMKRKVK NAPSLPSAGR VQSIALKLVC 
DKEKEIKAFI PIKYNKIQAK ISEDVIADFY YPTNSDFKND NTWILPEKID SIVAELNKNK 
SLLVKDFKVS QRKESQITPF KQSVLYKEAK YSATTVQISA QKLFEMGLIS YPRTDSTRMS 
DTFIAKAREY IKEKFGENYV ASDIKSFSGA QDAHEAIRPT DIYLIPQVAK TKYDLGEVES 
YIYTIIYNKT MSSLMTPPVR EIYRYELVNG LYYFKMSYSK VIFDGYYRVL NFEEPKPLPK 
YEIGEAIPVL EFTRFDKETQ PPARYNEGSL IKMLDDIKVG RPSTFASTIN IIKKRLFVET 
INGALHPTVF GEVVLKKLIE GFPNTITEEY TAQVEEELDE VSEGKADYKI LLEDFWNRFQ 
RSYDDASKTI EISIMPQEFL ERSCPRCGST LLYRNNSKKH TKFIGCSNFP ACRYSENADG 
TPTGQKTYKP RYYKKSSKAN