Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_R0053 |
Symbol | |
ID | 6412836 |
Type | rRNA |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 5528228 |
End bp | 5531053 |
Gene Length | 2826 bp |
Protein Length | |
Translation table | |
GC content | 54% |
IMG OID | 642715026 |
Product | 23S ribosomal RNA |
Protein accession | |
Protein GI | |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | AATCAAGTGC CTTAAGGGTG TTCGACGGAT GCCTTGGCGC TGAGAGGCGA TGAAGGACGT GCTACGCTGC GATAAGCCAT GGGGAGCTGC GAAGAAGCTT TGATCCGTGG ATTTCCGAAT GGGGAAACCC ACCTTCGATA GCCGGAACTC CAAGGCCTTG CGTTTCGAAA GAGACGTGAG GGTTTGGATT TCCGGTTATC AAGAGAAGGT ATGAGATCTC TGAATACATA GGAGGTTTCA AGCGAACCCA GGGAACTGAA ACATCTAAGT ACCTGGAGGA AAGGACATCA ACCGAGACTC CGCTAGTAGT GGCGAGCGAA CGCGGACCAG GCCAGTCATC ATTGGAAGAC AATTGGAATC TGTCAGGAAA GCAGAGCCTT AGAGGGTGAT AGCCCCGTAC AAGTAATTCA ACCATTGATG CTCGAGTAAG GCGGGACACG TGAAATCCTG TCTGAACATG GGGGGACCAC CCTCCAAGCC TAAGTACTCC TCAGCGACCG ATAGTGAACC AGTACCGTGA GGGAAAGGTG AAAAGCACCC CGACGAGGGG AGTGAAATAG TTCCTGAAAT CGGACACCTA CAAACAGACG GAGCCCAAGA TACGTTCTGG GTGACGTCGT ACCTTTTGTA TTATGGGCCA GCGACTTAAT TTAACGAGCA AGCTTAAGCC GGTAGGTGTA GGCGCAGCGA AAGCGAGTCT GAATAGGGCG TCAAGTTCGT TGGATTAGAC CCGAAACCTA GTGATCTAGC CATGAGCAGG TTGAAGGTGA GGTAACACTC ACTGGAGGAC CGAACGGGTG CCTGTTGAAA AAGGCTCCGA TGACTTGTGG TTAGGGGTGA AAGGCCAATC AAACTGGGAA ATAGCTGGTT CTCCGCGAAA GATATTTAGG TATCGCCTCG GACGAATACC TCAGGGGGTA GAGCACTGGA TGGGCTAGGG GGACTTACCG TCTTACCAAA CCCAACCAAA CTCCGAATAC CTGAGAGTAC TATCCGGGAG TCACACGGCG GGTGCTAACG TCCGTCGTGG AGAGGGAAAC AACCCTGACC TACAGCTAAG GCCCCCAATT CGTGGCTAAG TGGGAAAGGA TGTGGAAATC CCAAAACAAC CAGGAGGTTG GCTTAGAAGC AGCCATCCTT TAAAGAAAGC GTAACAGCTC ACTGGTCTAA ATAAGGGTTT CTGCGCCGAA GATGTAACGG GGCTCAAGCC ACGAGCCGAA GCTTAGGGTG TGCGCAAGCA CGCGGTAGCG GAGCGTTCTG TAAGCCTGCG AAGGGCGACC CGTGAGGGCG CCTGGAGGTA TCAGAAGTGC GAATGCTGGC ATGAGTAACG ACAAACACTG TGAAAGACAG TGTCGCCGAA AGTCCAAGGG TTCCTGCGTA AAGTTAATCT TCGCAGGGTT AGCCGGTCCC TAAGGCGAGG CCGAAAGGCG TAGTCGATGG GAATCACGTG AATATTCGTG AGCCAGTGGA TGGTGACGAA TCCCTTATGT TGTTCGACCT TACTGGATTG GTCGGGCCTC GACGGGGTTC CAGGAAATAG CCTCCACATC AGACCGTACC CGAAACCGAC ACAGGTGGAC TGGTAGAGTA TACCAAGGCG CTTGAGAGAA CTATGTTGAA GGAACTCGGC AATTTACCTC CGTAACTTCG GGATAAGGAG GCCTTCTGTT TGCGCAAGCA GGCAGGAGGG GCACAGACCA GGGGGTGGCA ACTGTTTAAC AAAAACACAG GGCTCTGCGA AATCGCAAGA TGACGTATAG GGTCTGACGC CTGCCCGGTG CCGGAAGGTT AAGAGGAGGA GTGCAAGCTC TGAATTGAAG CCCCGGTAAA CGGCGGCCGT AACTATAACG GTCCTAAGGT AGCGAAATTC CTTGTCGGGT AAGTTCCGAC CTGCACGAAT GGCGTAATGA CTTCCCCGCT GTCTCCAACA TAGACTCAGT GAAATTGAAT TCCCCGTGAA GATGCGGGGT TCCTGCGGTC AGACGGAAAG ACCCCGTGCA CCTTTACTGT AGCTTTGCGC TGGTATTCGT GACTGTTTGT GTAGAATAGG TGGTAGGCTT TGAAGCTCGG GCGCCAGCTC GGGTGGAGCC GCAATGTGAA ATACCACCCT AATGGTTATG GATATCTAAC CGCGATCCCT TATCGGGTTC CGGGACAGCG CATGGTGGGC AGTTTGACTG GGGCGGTCGC CTCCCAAAGA GTAACGGAGG CGTGCGACGG TAGGCTCAGA ACGGTCGGAA ATCGTTCGTC GAGTACAATG GCATAAGCCT GCCTGACTGC GAGACCAACA AGTCGAGCAG AGACGAAAGT CGGTCATAGT GATCCGGTGG TCCCGCGTGG ATGGGCCATC GCTCAACGGA TAAAAGGTAC GCCGGGGATA ACAGGCTGAT GACGCCCAAG AGTCCATATC GACGGCGTCG TTTGGCACCT CGATGTCGGC TCATCACATC CTGGGGCTGG AGAAGGTCCC AAGGGTTCGG CTGTTCGCCG ATTAAAGTGG TACGTGAGCT GGGTTCAGAA CGTCGTGAGA CAGTTCGGTC CCTATCTGCC GTGGGTGTTG GAATGTTGAG AGGATTTGCC CCTAGTACGA GAGGACCGGG GTGAACGTAC CTCTGGTGGA GCTGTTGTCG CGCCAGCGGC AGTGCAGCAT AGCTATGTAC GGACGGGATA ACCGCTGAAA GCATCTAAGC GGGAAACCCA CCTCAAAACG AGCATTCCCT TGAGAACCGT GGAAGACGAC CACGTTGATA GGCCGGATGT GGAAGTGCAG CAATGCATGT AGCTTACCGG TACTAATCGT TCGATTGGCT TGATTGCTCT CATTAT
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Protein sequence | |
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