| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5287 |
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| Symbol | |
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| ID | 6412988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 5703418 |
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| End bp | 5704635 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642715177 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_001994249 |
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| Protein GI | 192293644 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0508736 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGACCA CTCCCACCCC CGACGAAACG TCGTTCCGCT ATCACGGGTG GCGGATCGTC
GCGGTGTGCT TCATCGTCGC CACCTTCGGC TGGGGGCTCG GCTTCTACGG CCAGAGCGTG
TACCTCGCCG AACTGGCCCG ACTTCATGGC TGGCCATCGT CGCAGATCGC AACCGCCACG
ACCTTCTTCT ATCTCGCCGG TGCGCTGCTG GTGGCGTTCG TCGGCGATGT GATCCGCGCC
ATCGGCGCGC GCGCCTGCTT GCTCGGCGGC ATTGCGGCGA TGGCGCTCGG CACGGTGTTG
CTCGGCCGGA TCGACGCGCC GTGGCAACTC TATGCGGTGG ATGCGATCCT TGCGGTCGGA
TGGGCCGGCA CCAGTCTCGG CGCGATCACC AACACGCTCG GCCTGTGGTT CGACCAGCGC
CGCGGCATGG CGATTAGCCT CGCGCTGAAC GGTGCCAGCT TCGGCGGCAT CGCCGGCGTG
CCGGTGCTGG TGGCGCTGAT CGGCGCGCTC GGTTTCACCG GGGCAACCAC GGCGGCGGCG
ATCGCCGCGG TGGTGTTGCT GATGCCGCTG GTCGCGCTCA TTGTCGCGGC GCCGCCGCAT
CTTGCCAGTG CCGAGTCTGC GGCCACTGCA CCGCGGGCTC TGTCGTCCGG GGCGATCCGC
AGCGACGCGC TGCGGGACCT CGACTTTCTG ACAGCCACAA TCGCGTTTTC GCTGGTGCTG
TTCGCGCAGG TCGGGTTCAT CGTCCACCTG ATCGCCTATC TGGATCCGCT GATCGGGCGG
GAGCGCGCCG CGGTGGCGAT GTCGTTGCTG ACCGCGATGG CGGTGGTCGG CCGGGTTTCA
TTGTCGGTGG TGATCGATCG GCTCAATCAG CGTCTGGTCT CGGCGCTGTC ATTCGCCAGT
CAGGCTATGG CGCTGGGCGT GCTCATCTCC ACCCGCGACG CGACGCTGCT GCTGGTCGCC
TGCGCGCTGT TCGGCTTCTC GGTCGGCAAT CTGATCACCT TGCCGTCGCT GATCATCCAG
CGCGAATTTC CCACCTCGTC GTTCGGTGTC CTGGTGGCGC TCAACACCGC GATCAACCAG
GTCACCTACG CGTTCGGCCC CGGCGTCATC GGCCTGCTGC GCGACGCATC GGGCAGCTAT
ACGCTGCCGT TCGCCGGTTG CATCGCGCTG CAGCTCGCCG CTGCAGCGCT GATCATGGTG
CGGCTGAGGC GAAGATAA
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| Protein sequence | MVTTPTPDET SFRYHGWRIV AVCFIVATFG WGLGFYGQSV YLAELARLHG WPSSQIATAT
TFFYLAGALL VAFVGDVIRA IGARACLLGG IAAMALGTVL LGRIDAPWQL YAVDAILAVG
WAGTSLGAIT NTLGLWFDQR RGMAISLALN GASFGGIAGV PVLVALIGAL GFTGATTAAA
IAAVVLLMPL VALIVAAPPH LASAESAATA PRALSSGAIR SDALRDLDFL TATIAFSLVL
FAQVGFIVHL IAYLDPLIGR ERAAVAMSLL TAMAVVGRVS LSVVIDRLNQ RLVSALSFAS
QAMALGVLIS TRDATLLLVA CALFGFSVGN LITLPSLIIQ REFPTSSFGV LVALNTAINQ
VTYAFGPGVI GLLRDASGSY TLPFAGCIAL QLAAAALIMV RLRRR
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