| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5271 |
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| Symbol | |
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| ID | 6412972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 5685033 |
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| End bp | 5686091 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642715161 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_001994233 |
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| Protein GI | 192293628 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCATT TTCGCCACAA TATTATCCGC GCCGGGCTCG AAGCTCTTTA TTACACCGGC
GCGCATCGGG TGCTGCGCCC GATCTTTTCC GGAATCGGCA CGATTTTCAT GCTGCACAGC
GTGCGGCCGG CTCGCGACGA TTCGTTTCAG CCCAATCGCC ATCTCGAGGT CACGCCGGAC
TTCCTGCGCG CCACGCTGCG GCATTTGCGG GAGCTTGGGA TCGATCTCGT CCCGATGGAC
GAGTTGCACC GGCGGCTGCG TGCGCGCGAC TTCAGCCGGC GCTTCGCCTG CATCACGCTG
GATGACGGCT ATCGCGACAA TCGCGATTTT GCCCTGCCGG TGTTCGAGGA ATTCGGTGCA
CCGTTCACGG TGTTCGTCAC CAGCGACTTT GCCGAGGGCA CCGGCCGGCT GTGGTGGGTG
ACGCTGGAGC GGCTGATCGC CGCCCAGAGC CGGCTCGATG TGTCGATCGA GGGCCAGGAG
TTGCGCCTTG ACATTGCGAC GCCCGAAGCC AAGCAGGCGG CATTCGACCG GCTGCACGAT
CTGCTGCGCA GCCTGCCGAA TGGCGGCGAT CTCGATGCGG CGATGACGGC GCTGTGTCTG
CGTTATGGCG TCGACGAGAC TGCCGCCGCG CGCGAATTGT GCCTGCCTTG GCATGAACTG
CGCAGCTTCG CCGCGCACCC GCTGGTGACA ATCGGGGCGC ACGGCATCAC CCATTGCATG
CTGCGCCGGC AGACCGAACT GGTCGCCGCG CACGAACTCA CCGGCAGCCG CGCCCGGATC
CAGGACGAAC TGCAACGCCC CGTCGACCAT CTCGCCTATC CGTATGGCGA CAGGGCTTCG
GCAGGCCCGC GCGAATTCGC GATCGCGCAG GCGGTCGGCT ACAAGACCGC GGTGACGACG
CGCCCCGGTA TGATGTTCGC CGATTGCGCC GATCACCTCA CCGCGCTGCC GCGGATCTCG
CTCAACGGTC ACTACCAGGA CGACAGGCTG TTGCCGGTGC TGACTTCCGG GGCCGCGACC
GCGATGTGGA ACGGCTTCCG CCGTGTCGCT GCGGCGTGA
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| Protein sequence | MKHFRHNIIR AGLEALYYTG AHRVLRPIFS GIGTIFMLHS VRPARDDSFQ PNRHLEVTPD
FLRATLRHLR ELGIDLVPMD ELHRRLRARD FSRRFACITL DDGYRDNRDF ALPVFEEFGA
PFTVFVTSDF AEGTGRLWWV TLERLIAAQS RLDVSIEGQE LRLDIATPEA KQAAFDRLHD
LLRSLPNGGD LDAAMTALCL RYGVDETAAA RELCLPWHEL RSFAAHPLVT IGAHGITHCM
LRRQTELVAA HELTGSRARI QDELQRPVDH LAYPYGDRAS AGPREFAIAQ AVGYKTAVTT
RPGMMFADCA DHLTALPRIS LNGHYQDDRL LPVLTSGAAT AMWNGFRRVA AA
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