| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5240 |
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| Symbol | |
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| ID | 6412940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 5650070 |
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| End bp | 5652241 |
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| Gene Length | 2172 bp |
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| Protein Length | 723 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642715130 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001994203 |
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| Protein GI | 192293598 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCGGCT GTGCGGCCGG CTGTATCGCG CTGAGTTTTG GTCTGGCGAT AGCCGCGGCG
CGGGCCGAGC AGGCGCTGCC GCAGGTGACG ATCGATGCCC CGGCCGAGGC GAGGCCGAAG
CCTCCACGGC GCCACGCGCC GGAAGCGACG GCACGGCACG GCCAGGCGAT CCCGGCGCCG
ACACCGGGCG CATCCTCTTC GGCTGCAGCC CCGAGCGCGA GCGCAACGTC CGACGCGATG
AGCGCGCCGC AGAACCAGAC CGCGAGCAGT CGCGTCATCA CCGGCGTCGA GATCAACGCG
CTGCCGTTCA TGCGGCCCGG CGAGGCGCTG GAAGCCGCCC CCGGGCTGGT GGTCACTCAA
CATTCGGGTG AAGGCAAAGC CAACCAGTAT TTCCTGCGCG GCTTCAATCT CGACCACGGC
ACCGATCTCG CCATCACCAT CGACGGCATG CCGGTGAACA TGCCGACCCA CGGCCACGGC
CAGGGCTATG CCGACGTCAA CTTCCTGATC CCCGAACTGA TCAGCACCAT GACGGTGCGC
AAGGGACCGT ATTTCGCCGA CGTCGGCGAC TTCGGTTCGG CCGGCGCGCT CGGCATCGAA
TATCTGCGGG CGATGCCCAA GAACCTCGCC GAGGTGACGG TCGGCAGCTT CGGCTATCGC
CGGCTGCTCG GCGCCGGTTC GACGCGGGTC GGCGACGGCA CCTGGCTCGC CGCCTTCGAA
GCCAACACCT ACAACGGCCC GTGGGACGTG CCGGACAACG TCCGCAAGCT GAACGGCGTG
CTGCGCTACA GCCAGGGTAC CGCGACCGAT GGCTTTTCGC TGACCGGCAT GGCCTATTCC
AACCGCTGGA CCTCGACCGA CCAGGTCGCG CAGCGCGCGA TCGACCAGAA CCTGATCGGC
CGCTACGGCT CGCTCGATCC GACCGACGGC GGTACCTCGA GCCGCTACAG CCTGTCGGGC
CGGTTCGCGA AATCGAGCGA CCTCGGCCAG ACCGACATCA ACGCCTATGT GATCCGCTCG
TCGCTGCAGC TCTACAACAA CTTCACCTAC TTCCTCGACG ACCCGGTGAA CGGCGACCAG
TTCAACCAGC ACGATCGCCG CACCGTGCTT GGCCTGAACG GCACGCAGCG CTTCGACTAC
CGCTTCGCGG GCCTACCGGT GGAAACGCGG GTCGGGCTGC AGACGCGGTC CGACACCATC
AATGTCGGCC TCAACAAGAC TTATCAGCGC GACTGGCTGT CGACGGTGCG GGCCGACGAT
GTCTCCGAGC AGTCGCTCGG ACTGTGGACC GACACCACGG TGCGCTGGAC CGATTGGCTG
CGCACCACCG CCGGCGTGCG GCAGGATTTT TTCACCGGCC GGGTGATCAG CGACACACCG
GCAAATTCCG GCAACGCTTC GGCGGCGATG ACCAGTCCGA AGGCCGGCAT CGTGCTCGGC
CCCTGGGTCG GCACCGAGTT CTATGGCAAC GCCGGCACCG GGCTGCACAG CAACGATATC
CGCGGCGCCA CCATCACGGT CGATCCCAAC TCGGGCGATC CGGTGAATCG TGTGCCGCTG
CTGGTGCGCT CGAAGGGCGC CGAGCTTGGT ATTCGCAATA AATCGATCCC CGGGCTGACG
ACCTCGCTCG CCGTGTTCGT GCTCGATTTC GATTCCGAGC TGCTGTTCGT CGGCGATGCC
GGCACCACCG AACCGAGCCG GCCGAGCCGC CGCGTCGGCG TCGAATGGAC CAGCCAGTAT
CGGCCGCTGT CCTGGCTGGG TGTCGATCTC GACGTCGCCT ACACCAGAGC ACGGTTCACC
GACATCGATC CGGCCGGCGA CTTCATCCCC GGCGCACCGG CCTGGGTGGC CAGCGCCGGC
ATCACGCTCG GCGAGCAGCG CGGCTGGTTC GGTGCGTTGA AAGGCCGCTA TTTCGGACCG
CGACCGCTGA TCGAGGACGA CAGTGTGCAT TCGCTGTCGT CGCTGATCTT CAACGCCCGC
GCCGGCTATC GCTTCGACAA CGGCGTGCGG GTGCAGCTCG ACGTGCTGAA CCTGTTCAAC
GCCAAGACCA ATCAGATCGA ATACTACTAC CTGTCGCGAT TACCCGGCGA ACCGCTCGGT
GGCGTCAACG ATCGCCACGT TCATCCGGTG GAGCCGCTGG CAGTGCGGCT GACGCTAGCC
GGCACGTTTT GA
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| Protein sequence | MRGCAAGCIA LSFGLAIAAA RAEQALPQVT IDAPAEARPK PPRRHAPEAT ARHGQAIPAP
TPGASSSAAA PSASATSDAM SAPQNQTASS RVITGVEINA LPFMRPGEAL EAAPGLVVTQ
HSGEGKANQY FLRGFNLDHG TDLAITIDGM PVNMPTHGHG QGYADVNFLI PELISTMTVR
KGPYFADVGD FGSAGALGIE YLRAMPKNLA EVTVGSFGYR RLLGAGSTRV GDGTWLAAFE
ANTYNGPWDV PDNVRKLNGV LRYSQGTATD GFSLTGMAYS NRWTSTDQVA QRAIDQNLIG
RYGSLDPTDG GTSSRYSLSG RFAKSSDLGQ TDINAYVIRS SLQLYNNFTY FLDDPVNGDQ
FNQHDRRTVL GLNGTQRFDY RFAGLPVETR VGLQTRSDTI NVGLNKTYQR DWLSTVRADD
VSEQSLGLWT DTTVRWTDWL RTTAGVRQDF FTGRVISDTP ANSGNASAAM TSPKAGIVLG
PWVGTEFYGN AGTGLHSNDI RGATITVDPN SGDPVNRVPL LVRSKGAELG IRNKSIPGLT
TSLAVFVLDF DSELLFVGDA GTTEPSRPSR RVGVEWTSQY RPLSWLGVDL DVAYTRARFT
DIDPAGDFIP GAPAWVASAG ITLGEQRGWF GALKGRYFGP RPLIEDDSVH SLSSLIFNAR
AGYRFDNGVR VQLDVLNLFN AKTNQIEYYY LSRLPGEPLG GVNDRHVHPV EPLAVRLTLA
GTF
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