| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5196 |
|---|
| Symbol | |
|---|
| ID | 6412896 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | - |
|---|
| Start bp | 5598390 |
|---|
| End bp | 5599511 |
|---|
| Gene Length | 1122 bp |
|---|
| Protein Length | 373 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642715086 |
|---|
| Product | molybdate ABC transporter, ATPase subunit |
|---|
| Protein accession | YP_001994159 |
|---|
| Protein GI | 192293554 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4148] ABC-type molybdate transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR02142] molybdenum ABC transporter, ATP-binding protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGGCGC TGACTCCTCC CACGATTCGT GCCGCGTTTC GCGGCCAGCT CGGCGGTTTT
GCGCTGGATG CCGCTTTCAC GGTGCCGGCC ACCGGCATCA CCGGGCTGTT CGGGCCGTCC
GGCTGCGGCA AGTCCAGCGT GCTGCGTTGT CTCGCCGGCC TGCAGCATCT GCCGGGAAGT
AGCTGCGAAG TCGGCGGCGA GGTCTGGCAG GACGATGCGA CCTTCCTGAA GCCGCATCAT
CGTCCGATCG GCTACGTGTT CCAGGAAGCC AGCCTGTTTC AGCACCTGTC GGTGAAGGCC
AATCTGCTGT ACGGCGCGCC GCGCGAATCC GGCAAGGCCC ATGCCGACGC GGTCGAGTTC
GACGAAGTGA TCGAACTGCT CGGGCTTGCG AAGCTGCTGG CACGCTCGCC GCGCAATCTG
TCCGGCGGCG AGCGCCAGCG CGTCGCGATT GGCCGGGCGC TGCTGTCGCA ACCAAAACTG
TTGCTCATGG ACGAGCCGCT GTCGGCGCTC GACCGGCTCA CCAAGGACGA GATCCTGCCG
TTCCTGGAGC GGCTGCACGC GCGGCTATCG CTGCCGGTGA TCTATGTCAG CCACGACATC
ACCGAGATCG AGCGGCTCGC CGATCATCTG GTGCTGATGC AATCAGGTAA GGTCTTGGCG
GTCGGTCCGC TCACCGAGTT GCAGAGCGAT CCGAAGCTGC CGCTGGCGAT TGCGCGTGAC
GCCGCAGTGA ATTTCGATGC CGAGGTCGAA AGCTATGACG CCGACTACGG CCTGGTGAGG
CTGCAGATCG ACGGCGGGCG ATTGCTAGTG CCATCGACCC CGGTCGCCAG CGGCGAATTT
CGGCGGGTGA GGATCGCGGC CAGCGACGTC AGCCTGGCGC GCGAGTTGCC GCAGGCCAGC
TCGATCCTCA ACGCGATCGC GGCGCGGATC GTGGCCACGT CGCCGGTCGG CGCCAACGAG
ATGCTGGTGG TGCTGGCACT CGGGCGCGAA GGCCATGGCG GCCGGCTGCT GGCGCGTCTG
AGCCGGCGGT CGTGGGATCT GTTGCAGCTG GCCGAGGGCG TTGACGTCTA TGCGCAGATC
AAGGGCGTCG CGCTTGCACC GGGGCGCGAC GGCCACGTGT AG
|
|---|
| Protein sequence | MRALTPPTIR AAFRGQLGGF ALDAAFTVPA TGITGLFGPS GCGKSSVLRC LAGLQHLPGS
SCEVGGEVWQ DDATFLKPHH RPIGYVFQEA SLFQHLSVKA NLLYGAPRES GKAHADAVEF
DEVIELLGLA KLLARSPRNL SGGERQRVAI GRALLSQPKL LLMDEPLSAL DRLTKDEILP
FLERLHARLS LPVIYVSHDI TEIERLADHL VLMQSGKVLA VGPLTELQSD PKLPLAIARD
AAVNFDAEVE SYDADYGLVR LQIDGGRLLV PSTPVASGEF RRVRIAASDV SLARELPQAS
SILNAIAARI VATSPVGANE MLVVLALGRE GHGGRLLARL SRRSWDLLQL AEGVDVYAQI
KGVALAPGRD GHV
|
|---|
| |