| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5178 |
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| Symbol | |
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| ID | 6412878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 5582692 |
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| End bp | 5583720 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642715068 |
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| Product | amidohydrolase 2 |
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| Protein accession | YP_001994141 |
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| Protein GI | 192293536 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCATCG ACATTCACGG CCACTACACC ACCGCGCCGA AGGCGCTGGA GGATTGGCGC
AACCGGCAGA TCGCCGGCAT CAAGGATCCG TCCGTGATGC CGAAAGTATC CGAGCTGAAG
ATTTCGGATG ACGAGCTGCG CGCATCGATC ATCGAGAACC AGCTCAAGAA GATGCAGGAA
CGCGGCAGCG ACCTGACGGT GTTTAGCCCA CGCGCCTCGT TCATGGCGCA CCATATCGGC
GACTTCAACG TCAGCTCGAC CTGGGCGGCG ATCTGCAACG AGCTGTGCTA CCGCGTCTCG
CAGCTGTTCC CCGACAACTT CATCGGCGCC GCGATGCTAC CGCAATCGCC GGGCGTCGAT
CCGAAGACGT GCATTCCCGA GCTGGAGAAG TGCGTCAAGG AGTACGGCTT CGTCGCCATC
AACCTCAATC CCGATCCGTC GGGCGGGCAC TGGACCTCGC CGCCGCTGAC CGACCGGATC
TGGTATCCGA TCTACGAGAA GATGGTGGAG CTGGAGATCC CGGCGATGAT CCACGTCTCG
ACCAGCTGTA ACGCCTGCTT CCATACCACC GGCGCGCATT ATCTCAACGC CGACACCACC
GCGTTCATGC AGTGCGTCGC CGGCGATCTG TTCAAGGATT TCCCGGAGCT GAAATTCGTG
ATCCCGCACG GCGGCGGCGC GGTGCCGTAT CACTGGGGCC GCTTCCGCGG CCTGGCACAG
GAGATGAAGA AGCCGCTGCT TGAGGACCAC GTCCTCAACA ACATCTTCTT CGACACCTGC
GTGTATCACC AGCCGGGCAT CGACCTCCTC AACACCGTGA TCCCAGTCGA CAACGTGCTG
TTCGCCTCCG AGATGATCGG GGCGGTGCGC GGCATCGATC CGCGGACCGG ATTCTACTAC
GACGACACCA AGCGCTACAT CGAGGCGTCG ACCATCCTGA CGCCGGAAGA GAAGCAGCAG
ATCTACGAAG GCAACGCCCG CCGCGTCTAT CCGCGGCTCG ATGCTGCGCT CAAGGCGAAG
GGCAAGTAA
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| Protein sequence | MIIDIHGHYT TAPKALEDWR NRQIAGIKDP SVMPKVSELK ISDDELRASI IENQLKKMQE
RGSDLTVFSP RASFMAHHIG DFNVSSTWAA ICNELCYRVS QLFPDNFIGA AMLPQSPGVD
PKTCIPELEK CVKEYGFVAI NLNPDPSGGH WTSPPLTDRI WYPIYEKMVE LEIPAMIHVS
TSCNACFHTT GAHYLNADTT AFMQCVAGDL FKDFPELKFV IPHGGGAVPY HWGRFRGLAQ
EMKKPLLEDH VLNNIFFDTC VYHQPGIDLL NTVIPVDNVL FASEMIGAVR GIDPRTGFYY
DDTKRYIEAS TILTPEEKQQ IYEGNARRVY PRLDAALKAK GK
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