| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5163 |
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| Symbol | |
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| ID | 6412863 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 5565131 |
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| End bp | 5566027 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642715053 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_001994126 |
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| Protein GI | 192293521 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAGGC TGACCGCTGA TCCTCTCCGT TTGGGGTCTG ATCTTCGGCG TGCAGCGCTG
CTGGCGCTGG CGATCAGCTG CGCGCTGGCA TCTCCGGTCC GAGCGCAGGG AAGCGAAGCC
GCCGCCCAGA CAGTCACAGT ATTTCCCGCC GCCAAGGCCT GCTTTCCGGC GGTGGTCGAG
GTCTCCGGAT TCCTGATCCC CCGCGACGAG GTCTCGGTTC GCCCGGACCG GCCGGGCGCC
AAGATCAGCG ACGTGCTGGT CGACCCCGGT GAGACGGTCA GCCAAGGCCA AGCCCTGGCG
AAGCTCGAAG GCGGCACCAC GGTGCAGGCG CCGGTTGCCG GCCTCGTATC CGCTTCGACA
GCGTTGATCG GTGCCCCGGC GTCGCCGAAG GGCGAAGCAC TGTTCACCAT CGTCACCCGC
GGCGAGTTCG ATCTGGTCGG ACAGGTGCCG ACCCGCGACA TGCCGCGGCT GTCGGTCGGC
CAGACCGCCA CCGTGAAGGT GGTCGGCGAC AAGAACGAGA TGCAAGGCAA GGTCCGCCGC
GTGTCCGCCA CGGTGGAGCC GAAGACCCAG CTCGGCAACG TGTTCGTCGG TATCAGCTCG
GACAAACGCC TGCTCGCCAA CGCCTCCGGC CGCGCCACCA TCAAGACCGG CGAGAGCTGC
AACATCTCGG TGCCGCTCAC CGCGGTGATC TACAACCCGG TCGGCACCAT CGTGCAGGTG
GTGCGGCGGC AGGTGGTCGA AACCCGCCGA GTCGAGATCG GCCTGATGAA CGGCGGCAAC
GTCGAGATTC GCGAGGGCCT GAAGGAAGGC GACATCGTGG TCGAACGCGC CGGCGCGCTG
CTCCGCGAAG GCGATGCGGT GCGCCCGGTG CTGGCCGCCG GCGCCTCGGC GAAATAA
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| Protein sequence | MTRLTADPLR LGSDLRRAAL LALAISCALA SPVRAQGSEA AAQTVTVFPA AKACFPAVVE
VSGFLIPRDE VSVRPDRPGA KISDVLVDPG ETVSQGQALA KLEGGTTVQA PVAGLVSAST
ALIGAPASPK GEALFTIVTR GEFDLVGQVP TRDMPRLSVG QTATVKVVGD KNEMQGKVRR
VSATVEPKTQ LGNVFVGISS DKRLLANASG RATIKTGESC NISVPLTAVI YNPVGTIVQV
VRRQVVETRR VEIGLMNGGN VEIREGLKEG DIVVERAGAL LREGDAVRPV LAAGASAK
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