Gene Rpal_5157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_5157 
Symbol 
ID6412857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp5556154 
End bp5556651 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content62% 
IMG OID642715047 
Producttranscriptional regulator, MarR family 
Protein accessionYP_001994120 
Protein GI192293515 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.14169 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACGAAGC TCGATTTGTT CTCGTTCGTG CCGTTCCAGC TCAACCGGCT GGCCGCGGAA 
GTCAGCGCCG CGCTCTCGGA GGAGTATCAG CAGCGCTACG GGCTGGATAT TCCCGGATGG 
CGCATTCTCG CCACGCTCGG TTTCCGCAAC GACGCCTGCA CGGCGCAGTT CATTGCGCAG 
TGCACACGCA CGCACAAATC GACCATCAGT CGTGCGGTGA CTGGCCTGTT GGAGCGCGAA 
CTGATCGAAC GCGTCGAAAA CGAGGACGAT CGCCGCGAGT TTCGGCTGCG TCTGACCAAG 
AAAGGCCGCT GCCTGTATCA CGAGCTGGTG CCGCGGCTGA AACGGAAGGA ACAGGAGATC 
CTGTCCTGCC TGTCGTCGCG GGAGCGTGAC CAACTGGCGA CTGCTCTCGG CAAGATCGAG 
CGGCATCTGA ACCTGATCCA GGCCAGCCAC GACCACTCCG AGACGGCGCC GACAAAGGTG 
GCTGCTTCGG TTGGATAG
 
Protein sequence
MTKLDLFSFV PFQLNRLAAE VSAALSEEYQ QRYGLDIPGW RILATLGFRN DACTAQFIAQ 
CTRTHKSTIS RAVTGLLERE LIERVENEDD RREFRLRLTK KGRCLYHELV PRLKRKEQEI 
LSCLSSRERD QLATALGKIE RHLNLIQASH DHSETAPTKV AASVG