Gene Rpal_5135 details

Gene Information

• Locus tag: Rpal_5135
• ID: 6412829
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris TIE-1
• Kingdom: Bacteria
• Replicon accession: NC_011004
• Strand: +
• Start bp: 5523095
• End bp: 5523664
• Gene Length: 570 bp
• Protein Length: 189 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 642715019
• Product: uncharacterized peroxidase-related enzyme
• Protein accession: YP_001994098
• Protein GI: 192293493
• COG category: [S] Function unknown
• COG ID: [COG2128] Uncharacterized conserved protein
• TIGRFAM ID: [TIGR00778] alkylhydroperoxidase AhpD family core domain; [TIGR01926] uncharacterized peroxidase-related enzyme

Plasmid Coverage information

• Num covering plasmid clones: 31
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCAAGC CCGCCATCAG CCGCTTCCCG GTTCCGGAGA TCGCCAGCCT GCCGGAAGAC 
ATTCGCACCC GTATCCTCGC GGTGCAGGAG AAGTCCGGCT TCGTGCCCAA CGTGTTTCTC 
ACGCTGGCGC ATCGTCCCGA CGAATTCCGC GCCTTCTTCG CCTATCACGA CGCGCTGATG 
GACAAGCCGG GCCCGATCAC CAAGGCCGAA CGCGAGATGA TCGTGGTCGC CACCAGCAAC 
GCCAATCAGT GCCAATATTG CGTGATCGCG CACGGCGCGA TCCTGCGCAT TCGCGCCAAG 
AACCCGCTGC TCGCCGACCA GATCGCGGTG AACTATCGCA AGGCCGACAT CACCCCACGG 
CAGCGCGCGA TGCTCGACTT CGCCATGAAG GTTTCGGCCC AGGCCTATGA AGTCGGCGAC 
GCCGACATCG AAGCGCTGAA GCGCCACGAC TTCAGCGAAG AAGACATCTG GGACATCGCG 
GCGATCGCCG CCTTCTTCGG CATGTCCAAT CGCCTGGCCA ACGTCACCAG CATGCGGCCT 
AACGACGAGT TCTATGCGAT GGGGCGCTGA 

 

Protein sequence

MTKPAISRFP VPEIASLPED IRTRILAVQE KSGFVPNVFL TLAHRPDEFR AFFAYHDALM 
DKPGPITKAE REMIVVATSN ANQCQYCVIA HGAILRIRAK NPLLADQIAV NYRKADITPR 
QRAMLDFAMK VSAQAYEVGD ADIEALKRHD FSEEDIWDIA AIAAFFGMSN RLANVTSMRP 
NDEFYAMGR