Gene Rpal_5127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_5127 
Symbol 
ID6412821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp5513141 
End bp5513890 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content65% 
IMG OID642715012 
Productalpha/beta hydrolase fold 
Protein accessionYP_001994091 
Protein GI192293486 
COG category[R] General function prediction only 
COG ID[COG1647] Esterase/lipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAAG CGGTGATGGC CGGCGCGGAG GCGTTCGCGT TCGACGGCGG CAAAACGGGC 
GTGCTGCTGG TGCATGGATT TACCGGCAGC CCACAGAGCA TGCGCTATCT CGGAGAACGG
CTCGGCGAGC GCGGCTATTC CATTATCGGC CCTCGGCTGC CCGGACACGG CGTCTCGCCG
GCCGCAATGG CCAAGACTAC CGCCAACGAT TGGGTCGACT GCGCCGAGGA CGCGCTGCTG
GAGCTGTCGG CCAAATGCGA CAAAACCTTC GTGGCCGGAC TGTCGATGGG CGGCACGCTG
TCGCTGTATC TGGCCGCCTC GCATCCGGAC AAGGTCGCCG GCGTGATCCC GATCAACGCT
GCCGTTCAGA TCGACTCGCC CGATCTCGCC GGGCTGGCTT ACGCCCGCGG CCTGCCGGAA
TTCGTCCCCG GCATCGGCTC GGACATGGTC GACACCACCA CCAAGGAGCT GGCCTACGAC
CAGGTGCCGG TGACCTGCGT CAAGCAGGTG ATGGGACTGG CCGCCACCGC CCGCGCGCTG
CTGCCGAAGA TCAAGTGTCC GACCTTGGTG ATCAACTCGC GCGTCGACCA CGTGCTGTCG
CCGGCCAATG CGACCGTGAT CGCCAACCAC GTCGGCTCCA GCCGGATCGA AACGCTGTGG
CTGGACAATT CCTACCACGT CGCCACGATC GACAACGACA AGGACCTGAT CGCTTCTGCG
ATCGACAGTT TCGTGACGCG CAACCTGTGA
 
Protein sequence
MSEAVMAGAE AFAFDGGKTG VLLVHGFTGS PQSMRYLGER LGERGYSIIG PRLPGHGVSP 
AAMAKTTAND WVDCAEDALL ELSAKCDKTF VAGLSMGGTL SLYLAASHPD KVAGVIPINA
AVQIDSPDLA GLAYARGLPE FVPGIGSDMV DTTTKELAYD QVPVTCVKQV MGLAATARAL
LPKIKCPTLV INSRVDHVLS PANATVIANH VGSSRIETLW LDNSYHVATI DNDKDLIASA
IDSFVTRNL