Gene Rpal_5115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_5115 
Symbol 
ID6412809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp5497524 
End bp5498378 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content69% 
IMG OID642715000 
Producthypothetical protein 
Protein accessionYP_001994079 
Protein GI192293474 
COG category 
COG ID 
TIGRFAM ID[TIGR03309] selenium-dependent molybdenum hydroxylase system protein, YqeB family 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCAGC CTCTCCAACT CAGCGCCGGC GGCTTCGCAG TCGTGCTCGG GACTAATGAG 
ATCGCCTCCG CCGTCGCCGT GCATCTGCAT CGGGAAGGCT GTTGTGTGGT GATGTCACAC
GATCCGTTTC CGCCGGTGAT CCGCCGCAAG ATGGCGTTCC ACGACGCGCT GTACGGCGAC
GAGGTCACGG TCGAGGGCGT GCGTGGCGAG CGGGTCGATC ACGCCACCCA GATCTTCAAG
GCGCTGCGGC GCTCCGACAA CGTGCTGGTG AGCTGGCTAG CGCTGCCCGA TCTGCTGCCG
ATCGGCGCGG TCGACGTGCT GATCGATGCC CGGATGCAGA AGCACCGGGT CACGCCCGAT
CTGCGCGGGC TGGCGCGCAT CAGCGTCGGC CTCGGCCCCG GCTTTTCGAC CGCAGTGAAC
TGCGATGTCG CGATCGAAAC CCGCCCTGGC CGCAGCGGCC TGATCGTCGG CTCCGGCTGG
ACCGATGAGG CGGACGGTGT CGCCAGCCCG CTCGGCGGCG TCGGCGCCGA GCGCTTTGAG
TATTCCCAGG ACTGCGGTCG TTGGCGGACT GCGGTCGAGA TCGGCAGCCG GGTGTTCAGC
GGTTTCACGA TCGGCCATCT CGGCGGCGTT CCCGTGCGCG CGCCTTGCGA CGGCATCCTG
CGCGGCGTCG TGCGTGATGG CCAGGACGTG CCGCAGGGCG TGAAATTGCT CGAGGTGGAT
TCCCGCGGCC GACATGCGCA GTGGACCGGG ATCGACGATC GCGGCCGCGG CATCGCCAAG
GCGGTGCTGC GCGCCGTGCA GCCGCAGCCC GAGATCCGCA CGAGCTACGC GGCGCAGCCG
ATCGCGGTGT TCTGA
 
Protein sequence
MTQPLQLSAG GFAVVLGTNE IASAVAVHLH REGCCVVMSH DPFPPVIRRK MAFHDALYGD 
EVTVEGVRGE RVDHATQIFK ALRRSDNVLV SWLALPDLLP IGAVDVLIDA RMQKHRVTPD
LRGLARISVG LGPGFSTAVN CDVAIETRPG RSGLIVGSGW TDEADGVASP LGGVGAERFE
YSQDCGRWRT AVEIGSRVFS GFTIGHLGGV PVRAPCDGIL RGVVRDGQDV PQGVKLLEVD
SRGRHAQWTG IDDRGRGIAK AVLRAVQPQP EIRTSYAAQP IAVF