| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5078 |
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| Symbol | |
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| ID | 6412772 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 5465579 |
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| End bp | 5466520 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642714963 |
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| Product | hypothetical protein |
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| Protein accession | YP_001994042 |
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| Protein GI | 192293437 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0172] Seryl-tRNA synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.53363 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACATGG CGATCCGCAC CACACCGGCA GAGGCCGAGC TGCATCCGGT CGATCCGCTC
GATCACCTGG CTGAGCACCT GTTCCACAAG CTAGGTGCCG ACGGTGTCTA TGCGCGAACT
GCGCTGTATG AGGGCGTGGT CGAGAAGTTG GCGGCTCTGA TCTCGCGGCA TCGCGAGGAC
GGCACCGAAG TGATGCGGTT CCCACCGGTG ATGAGCCGGA GTCAGCTCGA GAAGTCCGGC
TATCTGAAAA GCTTCCCCAA TCTGCTCGGA TGCGTCTGCG GACTGCATGG TAGCGAGCAG
GAGATCAACG CCGCGGTCGG CCGGTTCGAT GCCGGCGGCG ATTGGACGGC CTCGCTGTCT
CCGGCGGACC TCGTGTTGTC GCCGGCGGCC TGCTATCCGG TGTATCCGAT CGCGGCGAGC
CGGGGCCCGC TGCCGGCGGG CGGCGCGCGC TTCGATGTTG GGGCCGATTG CTTCCGTCGC
GAACCGTCGA AGCATCTCGA CCGGCTGCAG TCGTTCCGCA TGCGTGAATA TGTCTGCATC
GGCACGCCGC AGGACGTCGC TGACTTCCGC CAGCGCTGGA TGGTGAAGGC GCAGGCGATC
GCGCGCGATC TCGGTCTCAC ATTCCGTGTC GAGACCGCTT CCGATCCGTT CTTCGGCCGT
GTCGGCCAGA TGAAGGCGAT CAGCCAGCAG CAGCAGGCTC TGAAGTTCGA ACTGCTGGTG
CCGCTGCGCT CGGAAGAGCA GCCGACCGCC TGCATGAGCT TCAACTATCA CCGCGAGCAT
TTCGGCGTGA CCTGGGGCAT CGAGGATGCG GCCGGCAACC CCGCCCATAC CGGCTGCGTC
GCCTTCGGCA TGGATCGCCT CGCGGTGGCG CTGTTTGCGA CCCATGGCAT CGATACAAGT
GCTTGGCCGG CCAGCGTGCG GGACGTGCTG TCGCTCGACT GA
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| Protein sequence | MNMAIRTTPA EAELHPVDPL DHLAEHLFHK LGADGVYART ALYEGVVEKL AALISRHRED
GTEVMRFPPV MSRSQLEKSG YLKSFPNLLG CVCGLHGSEQ EINAAVGRFD AGGDWTASLS
PADLVLSPAA CYPVYPIAAS RGPLPAGGAR FDVGADCFRR EPSKHLDRLQ SFRMREYVCI
GTPQDVADFR QRWMVKAQAI ARDLGLTFRV ETASDPFFGR VGQMKAISQQ QQALKFELLV
PLRSEEQPTA CMSFNYHREH FGVTWGIEDA AGNPAHTGCV AFGMDRLAVA LFATHGIDTS
AWPASVRDVL SLD
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