| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5072 |
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| Symbol | |
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| ID | 6412766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 5459304 |
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| End bp | 5461121 |
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| Gene Length | 1818 bp |
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| Protein Length | 605 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642714957 |
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| Product | long-chain-acyl-CoA synthetase |
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| Protein accession | YP_001994036 |
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| Protein GI | 192293431 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0947195 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGTGC AGGCAGCCGC TGCCATCCGC TCGAACGATG CGGCGCCCGA GCGCCCATCG
GTCGCCAAGA GCTGGCTGAA CGCGATCGAG ATCACTGCGC GGATCGAACG CGAGCCGGAA
CGTTTGCTGT GCGATACGGT CGCCGAATGG GCGATGCGCA CGCCGAATGC GCACGCATTA
TTGTCGGAGC GCGAACGGTT CAGCTACGCC GAATTGGCGC GACGAATTGA CGGCTACGCA
CGCTGGGCAC TCGCGCAAGG CATCGGCAAA GGCGTCTCCG TCGCGCTGCT GATGCCGAAC
CGCGCCGAAT ACCTGGCGAT CTGGCTTGGT ATCACCAAGG TCGGCGGCGT GGTGGCGCTG
CTCAACACAC AGCTCACCGG CGCCTCGCTG GCCCATTGCA TCGATGTCGC AGCGCCCAGC
CATATCATCG TGGCGAAGGA ATTGAGCGGC GCCTACGACA GCTCAACACA GCATCTGGCA
ACTGCGCCCC GGCTGTGGCT GCACGGCGAC GACGATACCG AGGTGGGGCT GTCGGACGCG
CTGGCGATCG CAAACGACGA TCCACTTACG GCGGACGAAC GTCCCGCTGT GACTGTCGAT
GATACGGCAC TGCTGATCTA CACCTCCGGC ACCACGGGGC TGCCGAAGGC AGCGCGGGTC
AGTCACCGCC GGGTGATGAG CTGGGCCGGC TGGTTCGCCG GCCTCACCGG CGCGACATCC
GACGATCGCA TCTACGATTG TTTGCCGATC TACCACAGCG TCGGCGGCGT GGTCGCGACC
GGCAGCCTGC TGATGGCGGG AGGCTCGGTC GTGATCGCCG AGAAGTTCTC CGCGCGGCGG
TTCTGGGACG ATATCGTCCG CTACGACTGT ACGCTGTTTC AATATATCGG CGAGCTGTGC
CGCTATCTGG TGCAGGCGCC GATCGCGCCG AACGAAACGC GGCATCGTCT GCGGCTCGCC
TGCGGCAACG GACTGCGCGG CGACGTCTGG GAGGCGTTTC AGGCGCGGTT CGCGATCCCG
CGCATTCTCG AATTCTACGC CTCCACCGAG GGCAACTTCT CGCTCTACAA TGTCGAGGGC
GAGCCCGGTG CGATCGGGCG GCTGCCGTCG TTTCTGGCGC ATCGCTTCCC GGCCGCACTG
GTGAAATTCG ATTTCGAAAC GGGACTACCG GTGCGCGACG AACAGGGCCG CTGCATCCGC
TGCGCCCGCG GCGAGGCCGG CGAAGCGATC GGCCGGATCG GCGAGGCCGA GCGCGGCGGC
GGCCGGTTCG AAGGCTACAC CAGCGATGGC GAGAGCGAGC GCAAGATCTT GCGCGACGTG
TTTGCACCGG GTGACGCCTG GTTCCGCACC GGCGACCTGA TGCTGCAGGA CGCCAAGGGC
TTCTTCCGCT TCGTCGACCG GATCGGCGAT ACCTTCCGCT GGAAGGGCGA GAACGTCGCA
GCGAGCGAAG TGGCCGACAT ACTCGCTGTC TGCCCCGGCG TAATCGACGC CAGCGTCTAT
GGCGTCAGCG TTCCGAACCA CGACGGCCGC GCCGGCATGG CTGCGCTGGT GACCGAGGAG
AGCTTCGATC TCGCGGCGCT CCATCGCCAT CTCGCCGAGC GGCTGCCGGC TTACTCACGG
CCGCTCTTTC TTCGGCTCCG GCCGACGCTC GATCTCACCG GCACGTTCAA GCAGGCCAAG
CAGACGCTGA TCACCGAGGG TTTTGACCCG TCGGTCGTCG GCGATCCGCT TTATGTCGCC
GACATCACTA CGGGCGGCTA CGTCACGCTC GACGCCCCCC TCTTCAGCCG CATCGCGCGC
GGCGCATTTA GACTGTGA
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| Protein sequence | MTVQAAAAIR SNDAAPERPS VAKSWLNAIE ITARIEREPE RLLCDTVAEW AMRTPNAHAL
LSERERFSYA ELARRIDGYA RWALAQGIGK GVSVALLMPN RAEYLAIWLG ITKVGGVVAL
LNTQLTGASL AHCIDVAAPS HIIVAKELSG AYDSSTQHLA TAPRLWLHGD DDTEVGLSDA
LAIANDDPLT ADERPAVTVD DTALLIYTSG TTGLPKAARV SHRRVMSWAG WFAGLTGATS
DDRIYDCLPI YHSVGGVVAT GSLLMAGGSV VIAEKFSARR FWDDIVRYDC TLFQYIGELC
RYLVQAPIAP NETRHRLRLA CGNGLRGDVW EAFQARFAIP RILEFYASTE GNFSLYNVEG
EPGAIGRLPS FLAHRFPAAL VKFDFETGLP VRDEQGRCIR CARGEAGEAI GRIGEAERGG
GRFEGYTSDG ESERKILRDV FAPGDAWFRT GDLMLQDAKG FFRFVDRIGD TFRWKGENVA
ASEVADILAV CPGVIDASVY GVSVPNHDGR AGMAALVTEE SFDLAALHRH LAERLPAYSR
PLFLRLRPTL DLTGTFKQAK QTLITEGFDP SVVGDPLYVA DITTGGYVTL DAPLFSRIAR
GAFRL
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