| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5064 |
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| Symbol | |
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| ID | 6412758 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 5448294 |
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| End bp | 5449430 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642714949 |
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| Product | glycoside hydrolase family 5 |
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| Protein accession | YP_001994028 |
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| Protein GI | 192293423 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2730] Endoglucanase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTCACCC GACGCACGAT CGCTTGCACC GCCCTCGGAC TGATCGCTCT GTGCTGGAGC
GTGCAAGCTG GCGCGCAGAA CCGCTGCACC GGCCCGACAT CCGGCGTTCC GCCTGAGACG
ATCGCAGCGC TGGCCCGCGG CGTGAACGTC TCAAACTGGA CCGAGAATGC GCGCCTGCAA
GGACCAAGTC CAGAATTGCT CCGCGCAGTG CGCGGCGCCG GCTTCACCCA TGTTCGCCTA
CCGGTCGCCG GCGATCTGGT GATGCGCGCC TTCAGTCCGC CGGCCACCAT CGAACGACAG
CTCGCAGGCG TCGATGCCGC GCTCACCGAG CTGATTGGCC TCGGCTTCTC TGTTTCGATC
GACCTGCATC CGGGCGATGG TTTCGGTCGC CTCCACCGCG ACGACCCCAA GGCCTCGATG
GCGGCGCTGA CCGATGCGTG GGGCAATCTA GCGACGGTGA TCCGCAAGCA TCCGGCCGAG
CGCGTGTTCG CCGAGCTGTT GAACGAGCCT GATATTGCGC CGGATCGTTG GCAGAGCGAG
GTCGAACAGC TCGCCTTCTT CGTGCGTGGG CTGTTGCCGA AGACTACGCT GATCGTCGGG
CCGACCTATT GGCAGCGCGC CGACTCGCTC CCGCAGTTCA GGCCGCTCGC CGACCGCAAC
GTCGTCTATG CGCTGCATTT CTATGATCCG ATGGTGTTCA CCCATCAGGG GCATTGGGAT
CCGGCTAATC CGCTGAGCCG GGTTCGCGAC CTGCCATTCC CGCTGGTCGC CAACGATCCC
GCCGTCGAGC GGCTGCGCAG CGAGCTGACC TTGCGCGGCG ATAATGAAGC GCTGCAGGAG
CTGGACAAAG CGATCGTTCA GGCCGGCTCG CCGAGCTATG TGGCCCGGCA GTTGATTCCG
GCCGTCGCCT GGCAGGAGCG CTACGCACGA CCGCTGATCA TCAATGAGTT CGGCGTGTTT
AAGCCGGCGG CGCCGCGGGA CAGCAGGCTG CGCTGGCTGG AATCGGTGGT CGATTCGGCC
GAAGCCAATT GCTGGGGCTG GACCTATTGG GAGTTGGATC AGGGATTTGG TCTGGCCGAT
CCGCGCACCG GCAGGTTGGA CGCTGGCGTA ATCGATGCGC TGATGCATCC GCGTTGA
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| Protein sequence | MLTRRTIACT ALGLIALCWS VQAGAQNRCT GPTSGVPPET IAALARGVNV SNWTENARLQ
GPSPELLRAV RGAGFTHVRL PVAGDLVMRA FSPPATIERQ LAGVDAALTE LIGLGFSVSI
DLHPGDGFGR LHRDDPKASM AALTDAWGNL ATVIRKHPAE RVFAELLNEP DIAPDRWQSE
VEQLAFFVRG LLPKTTLIVG PTYWQRADSL PQFRPLADRN VVYALHFYDP MVFTHQGHWD
PANPLSRVRD LPFPLVANDP AVERLRSELT LRGDNEALQE LDKAIVQAGS PSYVARQLIP
AVAWQERYAR PLIINEFGVF KPAAPRDSRL RWLESVVDSA EANCWGWTYW ELDQGFGLAD
PRTGRLDAGV IDALMHPR
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