| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5057 |
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| Symbol | |
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| ID | 6412751 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 5440233 |
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| End bp | 5441150 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 642714942 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001994021 |
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| Protein GI | 192293416 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1079] Uncharacterized ABC-type transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.799835 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCCTCA TTGAAGCAAT CCTGCTGTCG ATCGTCACCG CCTCGACGCC GCTGCTGCTG
GCGGCGAGCG GCGAGCTGAT CGCCGAGCGT GCCGGTGTTC TGAACCTCGG CGTCGAAGGC
ATGATGCTGA TCGGCGCGGT GTGCGGCTTC GCCGGCGCTT GGGCGACCGG CTCGACCGCG
ATCGGCGCGC TGTGCGGAAT CGCAGCCGGC GTCGCGCTTT CGGCGCTGTT TGCGCTGGCT
GCGATCGGGC TTGCGATCAA TCAGGTCGCG GCCGGCCTGG CGCTGACAAT CCTCGGCACC
GGCCTCGCCG GCCTGATCGG CGCGCCGTTC GTCGGCGAGA ACATCATTGC CGCACCGCAT
CTGTGGCTGC CATGGCTCAC GGACGTGCCG CTGATCGGCA AGCTGCTGTT CGGCCAGGAT
GCGCTTGTGT ATCTGGCGAT CGGGCTGATC GCCGCGATCG CCTACGTGCT CGCCTGCACC
CGCACGGGAT TGATCCTGCG CGCGGTCGGC GACGATCCAG CCTCGGCGCA TGCGCTGGGC
TACAATGTCG CGGCGATCCG GACGCTGGCG GTGCTGTTCG GTGGCGGCTG TGCGGGGCTC
GCCGGCGCCT ATCTGACGCT GGCCTATACG CCGTTCTACG CGCCCGGCAT GACGGCGGGT
CGCGGCTGGA TCGCGTTGGC GCTGGTGGTG TTTGCCTCGT GGCGGCCGGG CCGGCTGGTG
GCCGGTGCCA TCCTGTTCGG CGCCGTCTCG ATCCTGCAAC TGCACGCCCA GGCGATCGGC
CTCGGCGTGC CATCTCAACT TATGTCGGCG CTGCCCTATC TTGCCACGGT GCTGGTGTTG
GTGCTGATCT CGCGCGTCCG CCGGGGCGGG TCGGTGGCGC CGGCGGCGCT CGGAACCGCC
TTCGTGCCGG AGCGCTAG
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| Protein sequence | MGLIEAILLS IVTASTPLLL AASGELIAER AGVLNLGVEG MMLIGAVCGF AGAWATGSTA
IGALCGIAAG VALSALFALA AIGLAINQVA AGLALTILGT GLAGLIGAPF VGENIIAAPH
LWLPWLTDVP LIGKLLFGQD ALVYLAIGLI AAIAYVLACT RTGLILRAVG DDPASAHALG
YNVAAIRTLA VLFGGGCAGL AGAYLTLAYT PFYAPGMTAG RGWIALALVV FASWRPGRLV
AGAILFGAVS ILQLHAQAIG LGVPSQLMSA LPYLATVLVL VLISRVRRGG SVAPAALGTA
FVPER
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