Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_5039 |
Symbol | |
ID | 6412733 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 5420964 |
End bp | 5421812 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642714924 |
Product | Citryl-CoA lyase |
Protein accession | YP_001994003 |
Protein GI | 192293398 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2301] Citrate lyase beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCTCAA TGCTGTTCGT GCCGGGCGAC AGCCCGCGCA AATTCGAGAA GGCGTCGCAA GGCGGCGCCG ACGCACTGAT CATCGATCTC GAAGATTCCG TCGTCATCGA GAAGAAGGAC GATGCTCGCG GCCTGACCCG CACGATGTTG CAGGCGCCGC GCGGCCAACA GAAGCTCTAC GTCCGCGTCA ACGCGCTCGA CACCGGGCGC ACGCTCGGTG ACCTCGCCGC AGTGATGCCG GCGCGGCCCG ACGGCATCGT GCTGCCGAAA TCGCGTAGCG GCAATGACGT GCGCAACGTC GCGCTGTGGC TCGACGCCTT CGAAGCTGCC GCGGGTATCG AGCTTGGGAC AACCCGGATC GTCGTGGTCG CCACCGAGAC CGCCGGCTCG ATCTTCGGGC TCGGCAGCTA CAAGGACTGC TCGCCGCGGC TCGCCGGATT GATGTGGGGC GCGGAGGATC TCGCCGCCTC GCTCGGCGCC ACCGAGAACG GCTCGGGCGG CGTGTTTCAC AGTCCGTACC GGCTCGCGCG CGACCTGTGC CTGATGGGCG CGGCCGCGGC AGACGTTACG GCGATCGACA CCGTCTATAC CGACATCGAC AATCTCGCCG GCTTAGAAGC CGAGACCCGC GCAGCGCGGC GCGACGGCTT CACCTGCAAG GCGCTGATCC ACCCCAAGCA CGTCGATATC GTCAACGCCG CCTTCGCTCC GACCGAGGCC GAACGGACCT GGGCCGAAAA GGTGATCGCG GCGTTCGCAG ACAATCCTGA CGCCGGTACG CTGCGACTCG ACGGCAAGAT GCTCGACAAG CCGCATCTGC GCGCCGCGCA GAAGATTCTC GGACTATGA
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Protein sequence | MRSMLFVPGD SPRKFEKASQ GGADALIIDL EDSVVIEKKD DARGLTRTML QAPRGQQKLY VRVNALDTGR TLGDLAAVMP ARPDGIVLPK SRSGNDVRNV ALWLDAFEAA AGIELGTTRI VVVATETAGS IFGLGSYKDC SPRLAGLMWG AEDLAASLGA TENGSGGVFH SPYRLARDLC LMGAAAADVT AIDTVYTDID NLAGLEAETR AARRDGFTCK ALIHPKHVDI VNAAFAPTEA ERTWAEKVIA AFADNPDAGT LRLDGKMLDK PHLRAAQKIL GL
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