Gene Rpal_5021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_5021 
Symbol 
ID6412714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp5404202 
End bp5404693 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content64% 
IMG OID642714905 
Producthypothetical protein 
Protein accessionYP_001993985 
Protein GI192293380 
COG category[S] Function unknown 
COG ID[COG5328] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAATC CGGAACCAGA CGATTCCAAC AATCGCATCG TCGCGGTGAC GCTCGACGAG 
GAATCGATCG GGCGCTCGGG ACCGGACATC GAGCACGAGC GCGCCATCGC GATCTACGAT
CTGGTCGAAA AGAACCTGTT CGCGCCCGAA GGCGCGGGCG AGGGACCGTT CACCCTGCAC
ATCGGGATCA CCGGCAACCG GCTGATGTTC GACATCCGCC GCGAGGATGG CGCGCCGGTG
ATCACCCATC TGCTGTCGCT GACGCCGTTC CGCCGCATCG TGAAGGACTA CTTCATGATC
TGCGACAGCT ACTATCAGGC GATCCGCACC GCCACGCCCG ACAAGATCGA AGCCATCGAC
ATGGGCCGCC GCGGCATCCA CGACGAAGGC TCGCGCACGC TGCAGGAGCG GCTGGCCGGC
AAGGTCCGTA TCGATTTCGA GACCGCGCGG CGGCTGTTCA CGCTGATCTC CGTGCTGCAC
TGGAAGGGCT GA
 
Protein sequence
MSNPEPDDSN NRIVAVTLDE ESIGRSGPDI EHERAIAIYD LVEKNLFAPE GAGEGPFTLH 
IGITGNRLMF DIRREDGAPV ITHLLSLTPF RRIVKDYFMI CDSYYQAIRT ATPDKIEAID
MGRRGIHDEG SRTLQERLAG KVRIDFETAR RLFTLISVLH WKG