| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4978 |
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| Symbol | |
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| ID | 6412670 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 5357814 |
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| End bp | 5358863 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 642714861 |
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| Product | A/G-specific adenine glycosylase |
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| Protein accession | YP_001993942 |
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| Protein GI | 192293337 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1194] A/G-specific DNA glycosylase |
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| TIGRFAM ID | [TIGR01084] A/G-specific adenine glycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.183286 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCGCGCGC GGCCCGCCGC ATTGCTGGCC TGGTACGACC GGCATCGCCG CACCCTGCCG
TGGCGGGCGC CGCCCGGCGC GACCGCCGAT CCCTATGCGG TGTGGCTGTC GGAGATCATG
CTGCAGCAGA CCACCGTTCG TGCGGTCGGG CCGTATTTCG ACAAGTTCAT GGCGCGGTGG
CCGACGGTGA CGGCGCTGGG CGAGGCCTCG CTCGACGACG TGCTGAAGAT GTGGGCCGGG
CTCGGCTACT ATTCACGCGC CCGCAACCTG CACGCCTGCG CGGTGGCGGT GACGCGCCAG
CACGGCGGCC GCTTTCCCGA CACCGAGGAG GGGCTGCGGG CGCTGCCCGG CGTCGGGCCC
TACACAGCAG CCGCCATCGC CGCGATCGCG TTCAGCCGCC GGACCATGCC GGTCGACGGC
AATATCGAGC GGGTGGTGTC GCGGCTGTAC GCGGTCGAGG ACGAACTGCC GAAGGCCAAG
CCGCGCATCA AGGCGCTGGC CGAGACGCTG CTCGGCCCGT CCCGCGCCGG TGACAGCGCC
CAGGCGCTGA TGGATCTCGG CGCCACCATC TGCACGCCGA AGAAGCCGGC CTGCGCGCTG
TGCCCGCTGA TGCAGGGCTG CACCGCACGG CTGCGCGGTG ATGCCGAGAG CTTTCCGCGC
AAGGCGCCGA AGAAGACCGG GGCGCTGCGC CGCGGTGCCG CCTTCGTGGT GATCCGCGGC
GATCAGGTGC TGGTCCGCAG CCGCCCCGCC AAGGGCCTGC TCGGCGGCAT GACCGAGGTG
CCGAACTCCG ACTGGTTGCC CGATCAGGAC GAAGCCGCCG CCAAGGCGCA GGCCCCGGCG
CTGAAAGGCG TCGGTCGCTG GCATCGCAAA GCCGGCGTCG TCAGCCATGT GTTCACGCAC
TTCCCGCTGG AGCTGGCCGT GTATGTGGCG CATGCCTCGG CCGGCACCCG AGCCCCCACC
GGCATGCGCT GGACGCAGAT CTCGACGCTG TCGGACGAAG CTTTGCCCAA TCTGATGCGC
AAGGTGATCG CCCACGGCCT CGGTGATTGA
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| Protein sequence | MRARPAALLA WYDRHRRTLP WRAPPGATAD PYAVWLSEIM LQQTTVRAVG PYFDKFMARW
PTVTALGEAS LDDVLKMWAG LGYYSRARNL HACAVAVTRQ HGGRFPDTEE GLRALPGVGP
YTAAAIAAIA FSRRTMPVDG NIERVVSRLY AVEDELPKAK PRIKALAETL LGPSRAGDSA
QALMDLGATI CTPKKPACAL CPLMQGCTAR LRGDAESFPR KAPKKTGALR RGAAFVVIRG
DQVLVRSRPA KGLLGGMTEV PNSDWLPDQD EAAAKAQAPA LKGVGRWHRK AGVVSHVFTH
FPLELAVYVA HASAGTRAPT GMRWTQISTL SDEALPNLMR KVIAHGLGD
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