Gene Rpal_4936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_4936 
Symbol 
ID6412627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp5317639 
End bp5318484 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content66% 
IMG OID642714818 
Producthypothetical protein 
Protein accessionYP_001993900 
Protein GI192293295 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0226323 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCGCA GATTCTCCGC TCCGTATCTG AAGGAGCCCG TCTCCGGACT CGCCACCTGG 
GCGCGCAATC TCGCGGTATT CTCCGCGGTG GCGACGCTGG TGTCGATCGG TGTGGTGCGA
TTCGGCTTTC TCGAAATGCG CCCCGCGATG GCGACCTGGT TCGGGGCGCT GGCGCTGGCC
GGGGTGTCGA TCCTGCTGGC GCTCGCCGGC TTCGCGGCGA TCTGGCAGAA CGGCTCGCGC
GGCATCCCGC GCATCCTGCT GGCGCTGCTG CTGGACGCAT TAATCCTCGC CTACCCGGCC
TATCTCGGCT GGCAGTACCG CACCCTGCCG GCGATCCACG ACATCACCAC CGATTCGATC
GATCCGCCGC GGTTCGAAAC CCTGGCGCGA CTGCGGGTCG GCGACGACAT CAACACCGCG
GTCTATGCCG GCCTGTACTC GGCCGAGCGC CAGCGCGCCG CCTATCCGAA TATCGAGACG
CTTCAGGTCG AGATGCCGGT GCAGCGCGCC TACGACATCG TGCTGCAGCT GGTGAACCGG
CGGAAATGGC GGGTGGTCGA CGAACGGCCA CCGCAACTAC CGAAGCGCGA AGGCCATATC
GAGGCGGTGG CACGCACCAC CATCCTGAGC CTGCCCGAAG ACGTGGTGAT CCGGCTGCGG
CCGGACGGCG ACGACACGCG GATCGATATC CGGTCATCGT CACGCTATTT CGAAAGCGAC
CTCGGCAGCA ACGCGGCGCG GATTGCCAAA TTGACCGAGG ACATCAACAC CGCGGTCGAG
AACGCGCCGA CCCCGAAGCC CGAGCCGGCC GCCAAACAAC CGGCCAAGGC GAAAACCAAG
AAGTAA
 
Protein sequence
MARRFSAPYL KEPVSGLATW ARNLAVFSAV ATLVSIGVVR FGFLEMRPAM ATWFGALALA 
GVSILLALAG FAAIWQNGSR GIPRILLALL LDALILAYPA YLGWQYRTLP AIHDITTDSI
DPPRFETLAR LRVGDDINTA VYAGLYSAER QRAAYPNIET LQVEMPVQRA YDIVLQLVNR
RKWRVVDERP PQLPKREGHI EAVARTTILS LPEDVVIRLR PDGDDTRIDI RSSSRYFESD
LGSNAARIAK LTEDINTAVE NAPTPKPEPA AKQPAKAKTK K