| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4908 |
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| Symbol | |
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| ID | 6412594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 5278446 |
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| End bp | 5279984 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642714785 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001993872 |
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| Protein GI | 192293267 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.96823 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGACT TCATCACTCT TCCCGCCCTG GTCCGCGACA CCGCGCAGGC GCGGCCGGAC
CGGATCGCGG TGATCGACGG GGAACGGCAA TTGCGCTACG CGGAATTTGA TGCGCTGATC
GATCGCATCG CCGCGACTTT GCAGCGCGAT GGTCTGAAAC CGACCGACAC CATCTCGATC
TGTGCGCTGT CCTCGATCGA ATATGCGGCG ACTTTCCTTG CCGCACTGCG CGCCGGCATC
GCGGTCGCGC CGCTGGCGCC GTCGTCGACC GCCAAGGACT TCTCCGCGAT GGTGCGGGAC
TCCGCGGCCA AGATTCTGTT CACCGACGAC TTCGCCGCCA ATGCGATGAA GGACGCCGAG
ATCGATGCCG CTGTGAAGCG CGTGGCGTTC GACGACGGCA CGAGCGGCGA AGCGTTCACG
CGCTGGCTGG CGCCGGAAGG TACCAAGCCA GCGCCGGTGA CGATCGATCC GGAATGGGTG
TTCAACATCA TCTACTCGTC CGGCACGACC GGCACGCCGA AGGGCATCGT TCACAGCCAT
CAGATGCGCT GGGCGCAATA CGGCAAGCTC GACCCGATCG GCTATGGCCC CGACGCGGTG
ACGCTGCTGT CGACGCCGCT CTATTCCAAC ACGACGCTGG TCTGCTTCAA TCCGACGCTC
GCTGGCGGCG GCACTGTGGT GCTGATGAAG AAGTTCGATG CCCGCGGTTT CCTGGAGCTG
GCGCAGAAGT ATCGCGTCAC TCATGCGATG CTGGTGCCGG TGCAGTATCG CCGGATCATG
GCGCTGCCGG AGTTCGGTCA GTTCGACCTG TCGTCCTTCC AGATGAAGTT CTGCACCTCG
GCTCCGTTCG CGCCGGAGCT GAAGGCCGAT ATCCTGAAGC GCTGGCCCGG CGGTCTGACC
GAGTACTACG GCATGACCGA GGGCGGCGGC TCGTGCACGC TGCTGGCTCA CGAATTCCCG
AACAAGCTGC ACACCGTCGG CCAGCCGCGG CCCGGTCATG AAATCCGGAT GATCGACGAG
GACGGCAACT TCCTGCCGAA CGGTGAGGTC GGCGAAATCG TCGGCCGCTC CGACACCATC
ATGAAGGGCT ACCTCAATCA GCCGCAGAAG ACCGCTGAAG TGTTCTGGAC CGATAAGGAC
GGCAACCTCT GGGTGCGCAG CGGCGATGTC GGCCGGTTCG ATGCCGACGG CTTCATCACC
CTGATGGACC GCAAGAAGGA CATGATCATC TCGGGCGGCT TCAACATCTA CCCGAGCGAT
ATCGAGGCTG TAGCCGCCAA GCACCCCGAC GTGCTCGAGG TCGCGGTCGT CGGCATGCCG
TCGGAAGAGT GGGGCGAGAC CCCGGTGGCG TTCGTCGCCG CGCGCCCCGG CCGCAGCATC
GATCCGGCCG AACTGAAAAC CTGGACAAAC GGCCAGGTCG GCAAGACCCA GCGTCTCGCC
GAGGTGGTGC TGGTCGAGTC GCTGCCGCGC AGCGCCATCG GCAAGGTGCT GAAGCGCGAA
CTTCGCGACC AGCGTCTCGG CATGAAGGCG GCGTCGTAA
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| Protein sequence | MPDFITLPAL VRDTAQARPD RIAVIDGERQ LRYAEFDALI DRIAATLQRD GLKPTDTISI
CALSSIEYAA TFLAALRAGI AVAPLAPSST AKDFSAMVRD SAAKILFTDD FAANAMKDAE
IDAAVKRVAF DDGTSGEAFT RWLAPEGTKP APVTIDPEWV FNIIYSSGTT GTPKGIVHSH
QMRWAQYGKL DPIGYGPDAV TLLSTPLYSN TTLVCFNPTL AGGGTVVLMK KFDARGFLEL
AQKYRVTHAM LVPVQYRRIM ALPEFGQFDL SSFQMKFCTS APFAPELKAD ILKRWPGGLT
EYYGMTEGGG SCTLLAHEFP NKLHTVGQPR PGHEIRMIDE DGNFLPNGEV GEIVGRSDTI
MKGYLNQPQK TAEVFWTDKD GNLWVRSGDV GRFDADGFIT LMDRKKDMII SGGFNIYPSD
IEAVAAKHPD VLEVAVVGMP SEEWGETPVA FVAARPGRSI DPAELKTWTN GQVGKTQRLA
EVVLVESLPR SAIGKVLKRE LRDQRLGMKA AS
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