Gene Rpal_4874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_4874 
Symbol 
ID6412560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand- 
Start bp5239873 
End bp5240361 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content68% 
IMG OID642714751 
ProductNUDIX hydrolase 
Protein accessionYP_001993838 
Protein GI192293233 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGCTG TTCAGAATCT ACGGTTGAAG TTCGAGCCGG TGCTGACCCG GATGTTTCAT 
CTGTACTGGC GGTTCGCCCG CGGCATGACG CTGGGCGCGC GCGGCGTGGT GCTGGACGCT 
GAGGATCGGG TGTTCCTGAT CCAGCACTCG TATGTCGGCG GCTGGCATTT GCCGGGCGGC 
GGGGTCGAGG TCGGCGAGAG CTTCGTCGAT GCGCTGACCC GCGAGCTGAT GGAGGAGGGC 
CGCATCGCGC TGACGGGGAC GCCGGCGTTG CACGGCATCT TCTTCAACAG CCACGTCTCG 
CCGCGCGACC ACGTCGCCGT CTATGTGGTG CGTCAATACC AGCAGGATCG GCCGCCGGAG 
CCGAACCACG AAATCATCGC CAGCGGCTTC TTCGCCGCCG ACGCACTGCC CGCCGAAACC 
ACGCCGGGCA CCCGGCTGCG GATCGCCGAA GTGCTCGAGG GCCGGCCGCC GATCGCGACC 
TGGCGGTAA
 
Protein sequence
MTAVQNLRLK FEPVLTRMFH LYWRFARGMT LGARGVVLDA EDRVFLIQHS YVGGWHLPGG 
GVEVGESFVD ALTRELMEEG RIALTGTPAL HGIFFNSHVS PRDHVAVYVV RQYQQDRPPE 
PNHEIIASGF FAADALPAET TPGTRLRIAE VLEGRPPIAT WR