| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4869 |
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| Symbol | |
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| ID | 6412555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 5231979 |
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| End bp | 5234333 |
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| Gene Length | 2355 bp |
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| Protein Length | 784 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642714746 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001993833 |
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| Protein GI | 192293228 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.188313 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCATCTC GCCTCAAGAC CGGGCTGCTG CTCGGCACCG CAACGCTCGC CGTCTGCAGC
CCCGGCGCTC CAAGCGCGCG CGCCCAAACC GCCCTGCCCG AAGTCACCGT CACTGCGCCG
AGCCCGATCC AGCGCCGCCC GCACACCGAG ACCAAGCCAC GCCCGGCGCC CCGCGTCGCC
GCTTCGGCTC GGCAGCGCGG CCCCGCACCG GCGGAGACGC CGCCGGTGGC GCAGGCCACC
CCGGCACCGC AGCCCGGCAT CCTGCCGATC GTCACCGACC AGTTCGCCAC CGTCACGGTG
GTGCCGAATG AGGAAATCCG CCGCAGCGGC GGCGGCACGC TCGGCGACCT GCTCGCCAAC
AAGCCCGGCA TCACCGGCTC GGCCTACGCG CCCGGCGGCT CCAGCCGCCC GATCATCCGC
GGCCTCGACG TCAACCGCGT CAGCATCATC GAGAACGGCA CCGGCAGTAA CGGCGCGTCC
GACCTCGGCG AAGACCACTT CGTGCCGGTC GATCCACTCT CCACCAATCA GGTCGAAGTG
ATCCGCGGTC CGGCGACGCT GCGCTACGGC TCGACCGCGA TCGGCGGCGT CGTCAGCGCC
ACGAACAACC GGATTCCCGA CGCGCTGCCG CCCTGCGCGC AGCCGTTCCA GAGCTATGGC
CTGGCGAAGC CGCAGACGCT GTTCGGCGGC ACCGGCTGCA TGAACGGCGA AGTCCGCAGC
GCCGTCAGCT CGGTCGATCG CGGCGTCGAA GGCGCGGTGC TGCTCGATGC CGGCGGCAAC
AACGTCGCGG TCCATGCCGA CGTCTATGGC CGCAACGCCG GCGACTACAA TGTGCCGAGC
TATCCCTATG CGGCGCCTGG CATGCCGTTC AACGGCCGCC AGCCGAATTC CGCCGCGACG
GCGGCGGGCG CCTCGGTCGG CGGTTCGTAT CTGTTCGACG GCGGCTTCAT CGGCGCGTCG
ATCACCCAGA ACAATTCGCT GTATCACATC CCCGGCGTCG AAGGCTCGCA GAACGGCACG
CGGATCGACG CCAAGCAGAC CAAGTTCAAC GTCAAGGGCG AGTATCGCCC GGATGCGGCT
GCGATCGACG CGATCCGGTT CTGGGTCGGC GCTACCGACT ACAAGCACAA CGAAGTCGGT
CAGGCCACGG CCGGCGACCC GACCACCGAC GGCGTGCGCC AGACCTTCAC CAATCGCGAG
CAGGAAGGCC GGCTCGAAGT CCAGCTGGCG CCTTTCAACG CCGGCTTTGC GGCGATCACC
ACCGCGGTCG GCGTGCAGGC CAGCCATCAG GAATTGACGG CGCCGAGCCC GGACGATCCG
GGCAGCCCGC TGAACGGCCT GTTCGATCCG AACAAGAACA CCAAGGCGGC GGGCTACGTG
TTCAACGAGT TGCAGTTCAC CCGCACCACC AAGGCGCAGG TCGCCGGCCG CATCGAGCAT
GTCGAACTGT CCGGCACCAC GCCGGCGTTC GTGCCGGAGA TCTTCGACCT CAACAATGAT
CCGAGTGCCA TCGGTCCTGC GACCCAGCGC AATCTGTCGT TCACGCCGAA GAGCTTCAGC
GTCGGCCTGA TCCAGGCGCT GCCGTGGGAT CTGTCGGCCA GCATCACCGG ACAATATGTC
GAGCGGGCGC CGAAACCGGC AGAACTGTTC TCGCGCGGCG GCCACGACGC CACCGCCACC
TTCGACATCG GCAATCCCAA CCTGAAGATC GAAACCGCCA AGTCGGTCGA GGTCGGGCTG
CGCCGCGCCA CCGGACCATT CCGGTTCGAG ATCACCGCTT ACTACACGCA GTTCAGCGGC
TTCATCTATC GGCGCCTGAC CGGCAACACC TGTGAAGACG GCTCCTGCGT CGATCCGGGC
ACCGGCACGC TGGAATTGAA CCAGGCGATC TACTCGCAGC GTGACGCCAC CTTCAAAGGC
GGCGAATTCC AGAGCCAGCT CGACGTCGCC CAGATCTATG GCGGCACCTT CGGCATCGAG
AACCAGTTCG ACATCGTGCG GGCGACCTTC GCGGACGGCA CCAACGTGCC GCGGATTCCG
CCGATGCGGG TCGGCGGCGG CCTGTTCTGG CGTGACGCCA ACTGGCTGAT GAAGGTCAAC
CTGCTGCACG CCTTCGCACA GAACGACGTA GCACCGATCG CCGAAACCAC GACGCCCGGC
TACAACCTGC TGAAGGCCGA AGTCAGCTAC CGGACCAAGC TCGATCCCAA CGCCTGGGGC
GCGCGCGAGA TGCTGGTCGG CATCGTCGGC AACAATCTGC TCAACGAGGA CATCCGGATC
GCGACGTCCT ACAGCAAGGA CAACGTGCTG ATGCCCGGCA TCGGCGTGCG GGCGTTCGCG
AACCTGAAGT TCTGA
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| Protein sequence | MSSRLKTGLL LGTATLAVCS PGAPSARAQT ALPEVTVTAP SPIQRRPHTE TKPRPAPRVA
ASARQRGPAP AETPPVAQAT PAPQPGILPI VTDQFATVTV VPNEEIRRSG GGTLGDLLAN
KPGITGSAYA PGGSSRPIIR GLDVNRVSII ENGTGSNGAS DLGEDHFVPV DPLSTNQVEV
IRGPATLRYG STAIGGVVSA TNNRIPDALP PCAQPFQSYG LAKPQTLFGG TGCMNGEVRS
AVSSVDRGVE GAVLLDAGGN NVAVHADVYG RNAGDYNVPS YPYAAPGMPF NGRQPNSAAT
AAGASVGGSY LFDGGFIGAS ITQNNSLYHI PGVEGSQNGT RIDAKQTKFN VKGEYRPDAA
AIDAIRFWVG ATDYKHNEVG QATAGDPTTD GVRQTFTNRE QEGRLEVQLA PFNAGFAAIT
TAVGVQASHQ ELTAPSPDDP GSPLNGLFDP NKNTKAAGYV FNELQFTRTT KAQVAGRIEH
VELSGTTPAF VPEIFDLNND PSAIGPATQR NLSFTPKSFS VGLIQALPWD LSASITGQYV
ERAPKPAELF SRGGHDATAT FDIGNPNLKI ETAKSVEVGL RRATGPFRFE ITAYYTQFSG
FIYRRLTGNT CEDGSCVDPG TGTLELNQAI YSQRDATFKG GEFQSQLDVA QIYGGTFGIE
NQFDIVRATF ADGTNVPRIP PMRVGGGLFW RDANWLMKVN LLHAFAQNDV APIAETTTPG
YNLLKAEVSY RTKLDPNAWG AREMLVGIVG NNLLNEDIRI ATSYSKDNVL MPGIGVRAFA
NLKF
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