Gene Rpal_4842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_4842 
Symbol 
ID6412528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp5204886 
End bp5205746 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content65% 
IMG OID642714719 
Productprolipoprotein diacylglyceryl transferase 
Protein accessionYP_001993806 
Protein GI192293201 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0682] Prolipoprotein diacylglyceryltransferase 
TIGRFAM ID[TIGR00544] prolipoprotein diacylglyceryl transferase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCATTCT TCGCCGTCGC CTTTCCCGTA TTCGATCCGG TGGCCGTCGC GATCGGTCCG 
TTCGCGATCC GCTGGTACGC GCTGGCCTAT ATCGCCGGCA TCGTCATCGG CTGGCTGTAT
GCCCGGATGC TGCTGCAACG ACAGCGGCTG TGGGGCGGCC CATCGCCGAT CTCGCTGGAA
GCGTTCGACG ACTTCATCCT GTGGGTCACC ATCGGCATCA TTCTCGGCGG CCGCACCGGC
TACGTGCTGT TCTACAATCT CGACTTCTTC ATCCGGCATC CGGCCGAGAT CTTCGAATTG
TGGAAGGGCG GGATGTCGTT CCACGGCGGC TTCATGGGCT GCGTGGCGGC AGTGGTGCTG
TTCGGATGGA AGCGTAAGGT GCCGATCCTG TCGCTCGGCG ACATCACCTG CGCGGTCGGC
CCGATCGGGC TGTTCCTCGG CCGCATCGCC AACTTCATCA ACGGCGAATT GTGGGGCCGT
CCCGCCGACG CATCGGTGCC GTGGGCGATG GTGTTTCCCA ATGCCGGCCC GCTGCCGCGG
CATCCGAGCC AACTCTATGA AGCCGGGCTC GAGGGCATCG GGCTGTTCGT CATCCTGGCG
CTGATGATCC GCGCCGGCGC CCTCAAGCGG CCGGGCCTGA TCATCGGCGC GTTCCTGACC
TTCTACGGCC TTGCCCGCAT CACCGGTGAA TTCTTCCGTG AACCCGATCC GCAGCTCGGC
TTCCTGTGGG GCGGCATGAC CATGGGCATG CTGCTTTCGA TCCCGATGGT GATCGTCGGC
ATCGTGGTGA TGATCACCAC CTGGCGGCGC GGACGCGGGG CGCCCGCGGC GGCGACACCT
TCCAGCGAGG CAGCCTCATG A
 
Protein sequence
MPFFAVAFPV FDPVAVAIGP FAIRWYALAY IAGIVIGWLY ARMLLQRQRL WGGPSPISLE 
AFDDFILWVT IGIILGGRTG YVLFYNLDFF IRHPAEIFEL WKGGMSFHGG FMGCVAAVVL
FGWKRKVPIL SLGDITCAVG PIGLFLGRIA NFINGELWGR PADASVPWAM VFPNAGPLPR
HPSQLYEAGL EGIGLFVILA LMIRAGALKR PGLIIGAFLT FYGLARITGE FFREPDPQLG
FLWGGMTMGM LLSIPMVIVG IVVMITTWRR GRGAPAAATP SSEAAS