| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4808 |
|---|
| Symbol | |
|---|
| ID | 6412494 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | - |
|---|
| Start bp | 5176181 |
|---|
| End bp | 5176696 |
|---|
| Gene Length | 516 bp |
|---|
| Protein Length | 171 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 642714686 |
|---|
| Product | protein of unknown function DUF992 |
|---|
| Protein accession | YP_001993773 |
|---|
| Protein GI | 192293168 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTACCC TGAGACAGTT CGGCATCGCT GCGGTCGCGT TGATCGCCTC GGTTGCGAGC
GCGAGCGCGC AGCAGCGCGT GCAGGTCGGC GTGATCGAAT GCGCCGGCGG TCCGAACGTC
GGCTACGTGG TCGGGTCGAC CACCCAGCTC GAGTGCCTGT TCCGGGCCGA CGGCCGTCGT
CCCGAGCCGT ACATCGCGCA CGTGCAGCGC ATCGGCGTCG ACCTCGGCTT CACCCAGAAC
ACCGGCCTGG CCTGGGCCGT GTACGCCCCG ACTCAGCGCG TCGGCCGCGG TGACCTCGGC
GGCAGCTACG GTGGCGTCGG CGCCAACGCG TCGTTCGGCT TCGGCGTCGG CGGCAACCTG
CTGATCGGCG GGTCGAACAA CGCCTTCGCG CTGCAGCCGC TCAGCCTGCA GGGCCAGACC
GGTCTCAACG CGACCGCGGG CATCGTCGAC GTGCAGCTGC TGCCGGCCCC GATCGCCAAG
AAGCACTATC GCAAGCATCG CCGTCATCAT CACTAA
|
|---|
| Protein sequence | MFTLRQFGIA AVALIASVAS ASAQQRVQVG VIECAGGPNV GYVVGSTTQL ECLFRADGRR
PEPYIAHVQR IGVDLGFTQN TGLAWAVYAP TQRVGRGDLG GSYGGVGANA SFGFGVGGNL
LIGGSNNAFA LQPLSLQGQT GLNATAGIVD VQLLPAPIAK KHYRKHRRHH H
|
|---|
| |