Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_4714 |
Symbol | |
ID | 6412400 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 5073625 |
End bp | 5073942 |
Gene Length | 318 bp |
Protein Length | 105 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642714593 |
Product | conserved hypothetical protein; putative cytochrome c |
Protein accession | YP_001993680 |
Protein GI | 192293075 |
COG category | [C] Energy production and conversion |
COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.361108 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGACGAC TACTCGCCTG TGCGGCGATC CTGCTGATGA TAGCGGGTCA AGCGGCCGCC GCGACTCCGT CGGAGCGCCG TGGACTTGGC TTTGCCAAAT CGCACTGCGC GCGCTGCCAC GCCATCGGCC GCAGCGGTAA AAGCCGGCTG CCACAAGCTC CGCCGTTCCG TACCCTGCAC ACCCGCTACC CGATCGAGAC GTTGGCCGAA GCCTTTGCGG AAGGTATTTA CACCGGCCAC CCGCGGATGC CGGCGTTCGA GCTCGATCCG GACGAGATCA ACGACCTTTT GTCGTACCTG AAGACTTTGG AGCGGTAG
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Protein sequence | MRRLLACAAI LLMIAGQAAA ATPSERRGLG FAKSHCARCH AIGRSGKSRL PQAPPFRTLH TRYPIETLAE AFAEGIYTGH PRMPAFELDP DEINDLLSYL KTLER
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