Gene Rpal_4700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_4700 
Symbol 
ID6412386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand- 
Start bp5058930 
End bp5059589 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content66% 
IMG OID642714579 
Producthypothetical protein 
Protein accessionYP_001993666 
Protein GI192293061 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.574193 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCAAGT TCTCAGGCCG GATCGGACTC GGCTTTGCCG CCGTGGTGGC TGTAACCGCC 
GCGACGCCGG CGCATGCGCA GGATTTCTTT CAGGCGCTGT TCGGCGGCTT CCAGGCGCCG 
CGCTATCAAC CCCGGATGCC GGCATTGCCG TTCGCCGACG ACGGATACGG TCGCGACACG 
CGCGAGCGGC TGGCCCGTCC GAGTGCGCGG ACTTATTCGA CCGGTGGTCA GGCCTATTGC 
GTTCGCACTT GCGACGGACG CTACTTTCCG ATCTCGTCCA GCGGCAGCGA CACCAAGGCC 
GAGACCTGCA ACAGCTTCTG CCCGGCCAGC GACACCAAGG TGGTGTACGG CTCCTCGATC 
GAGAGCGCGC GCACCTCCGG CGGCAAGTCG TATTCGGAGC TGCCGAATGC GTTCAAGTTC 
CGAACGGAGA TCGTGGCCGG CTGCACCTGC AATGGCAAGG ATCAGTTCGG CCTCGCCAAG 
ATTCCGATCG AGGACGACCC GACGGTGCGC AAGGGCGATA TCATCGCCGG CAAGGACGGC 
CTCATGGTCG CCGCGCGGAA CGCCTCAGGC AACGATGGCA AGGTCGCGTT CGCTCCGGCG 
GCCGGTGCCG ATCACGTCCG CGCCGGCTAT TCCAAGGTGC CGGTGCTGGC CCAGGACTGA
 
Protein sequence
MRKFSGRIGL GFAAVVAVTA ATPAHAQDFF QALFGGFQAP RYQPRMPALP FADDGYGRDT 
RERLARPSAR TYSTGGQAYC VRTCDGRYFP ISSSGSDTKA ETCNSFCPAS DTKVVYGSSI 
ESARTSGGKS YSELPNAFKF RTEIVAGCTC NGKDQFGLAK IPIEDDPTVR KGDIIAGKDG 
LMVAARNASG NDGKVAFAPA AGADHVRAGY SKVPVLAQD