| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4685 |
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| Symbol | |
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| ID | 6412371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 5044067 |
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| End bp | 5045428 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642714564 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_001993651 |
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| Protein GI | 192293046 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTCTC CACCCGCGGC AACGTCCCTC GCGGCGCTGA GGGCGCGCCT GACGTCGCTG
TTCGGCGGTT CCAACGAAGC CTCGCTCACC AACCGGCTCG CCGGCACCAT TTTCCTGATC
CGTGTCGTCA GCGCAGGTCT CGCCTATGGG GCGCAGATCC TGCTGGCGCG CTGGATGGGT
GGCTCTGACT ACGGCATCTA CGTCTATGTC TGGACCTGGG TGCTGCTGCT CGGCTCCATG
CTGGATTTCG GCATCTCCGC CTCAGCCCAG AAGATCATTC CGGAATATCG CGCGCGCGGC
GAACTCGACA GGCTGCGCGG TTTTCTGTCC GGCAGCCGTT GGGGCACGCT GGCGGCCTCG
AGCGTGGTAT CGCTGCTGCT CGCCGCACTG GTCTGGGCAC TGTCGCCGCT GATCGGCGAC
GCCACAGTCA TATCGCTGTA CCTCGGCTGC CTGACGCTCC CGGCATTCGT GGTCGCCAAC
ACCCAGGACG GCATTGCCCG CTCGCACGAC TGGATGCGGC TCGGGCTGAT GCCGCAATTC
ATCATCCGGC AGGCGCTGAT CATCGGCTTC ACCGCCGGGC TGTTCGTGCT CGGCTTCGAG
CTCGGTGCGA TCGCCGCGAT GGCGGCGAGC TGTGCGGCGG TGTGGATCGC GATGCTCGGA
CAGATGATAG CGCTCAACCG CAGGCTTGCC GGCCACGTCC CGCCCGGCCC GCGCGCCTAT
GACGTCCGCG GCTGGCTTGC GACCTCGCTG CCGATCCTCC TGGTCGAGAG CTTCTACCTG
TTGCTGTCCT ACACTGACGT CCTGGTGCTG CAGCAATTCA GCACGCCCGA GGAAGTCGGC
ATCTACTATG CGGTGGTGAA GACGCTGGCG CTGGTGTCGT TCATTCACTA CGCGATGTCG
GCCACCACTG CGCATCGCTT CACCGAATAC AACGCGGCCG GCGACAAGGT CCGGCTGGCG
GCGTATGTGC GCCACGCGAT CGTGTGGACG TTCTGGCCGT CGCTGGTGGC GACGCTGGCG
CTGCTGGCAC TCGGCGAGCC GCTGCTGTGG CTGTTCGGGC CGCAATTCAC GTCCGGCTAC
GGCATCATGT TCGTCGCCGC GATCGGCCTG ATGGTCCGTG CCGCGATCGG TCCGGTCGAG
CGCCTGCTCA ACATGCTCGG CCACCAGCAT GTCTGCGCCC TCGCCTATGC GCTGGCGTTC
GCGGTCAATC TGGCGCTGTG CCTGATCCTA GTGCCCCGCT TCGGCGGCTA CGGCGCCGCT
GCCGCCACCT CCGCAGCCCT CACCTTCGAA ACCGTGATGC TGTTCTGGAT CGTCCGCAAA
CGCCTCGGCC TGCACGTGCT GGCGTTCGGC AGCAAAGGCT AG
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| Protein sequence | MDSPPAATSL AALRARLTSL FGGSNEASLT NRLAGTIFLI RVVSAGLAYG AQILLARWMG
GSDYGIYVYV WTWVLLLGSM LDFGISASAQ KIIPEYRARG ELDRLRGFLS GSRWGTLAAS
SVVSLLLAAL VWALSPLIGD ATVISLYLGC LTLPAFVVAN TQDGIARSHD WMRLGLMPQF
IIRQALIIGF TAGLFVLGFE LGAIAAMAAS CAAVWIAMLG QMIALNRRLA GHVPPGPRAY
DVRGWLATSL PILLVESFYL LLSYTDVLVL QQFSTPEEVG IYYAVVKTLA LVSFIHYAMS
ATTAHRFTEY NAAGDKVRLA AYVRHAIVWT FWPSLVATLA LLALGEPLLW LFGPQFTSGY
GIMFVAAIGL MVRAAIGPVE RLLNMLGHQH VCALAYALAF AVNLALCLIL VPRFGGYGAA
AATSAALTFE TVMLFWIVRK RLGLHVLAFG SKG
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