| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4648 |
|---|
| Symbol | |
|---|
| ID | 6412334 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | + |
|---|
| Start bp | 5011351 |
|---|
| End bp | 5011659 |
|---|
| Gene Length | 309 bp |
|---|
| Protein Length | 102 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642714527 |
|---|
| Product | transcriptional regulator, GntR family |
|---|
| Protein accession | YP_001993614 |
|---|
| Protein GI | 192293009 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1802] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGCG TAAGCCCGAT CCTGCACTAT GCGTTGGATG GCGACGGCCC GCGGAGCCTG
ACTTCCGCGG TACAGGAGCG GATACGCGCG GACATTCTGG CGACCCGTCT GCTACCCGGA
CAAAAGCTGC ACATCGCAGG CCTTGCCAAG CAGTTCTCGG TCAGTCTCGC GGCCGTCCGC
GAAGCGCTGT CCCGCCTCGT CGCCGACGGG CTGGTGCAGG CCGCCGACCA GCGCGGCTTC
CGCGTCAGCC GGTGTCACTG CAGGATCTCG CCGACGTCAC CCGATCGCGT ATCGAGATCG
AAGGCTTGA
|
|---|
| Protein sequence | MSSVSPILHY ALDGDGPRSL TSAVQERIRA DILATRLLPG QKLHIAGLAK QFSVSLAAVR
EALSRLVADG LVQAADQRGF RVSRCHCRIS PTSPDRVSRS KA
|
|---|
| |