| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4635 |
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| Symbol | |
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| ID | 6412321 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4995466 |
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| End bp | 4996182 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642714514 |
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| Product | 3-oxoacid CoA-transferase, A subunit |
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| Protein accession | YP_001993601 |
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| Protein GI | 192292996 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit |
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| TIGRFAM ID | [TIGR02429] 3-oxoacid CoA-transferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.853485 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAAGG TCTACCCCGA CGCCAAGGCG GCACTCGACG GCATCTTGCG GGACGGCATG
ATGATCATGT CCGGTGGCTT CGGCCTTTGC GGCATTCCCG AGACCCTGTC CGACGCGATC
CGCGATGCGG GCGTCAAGGA TCTCACCTTC GTTTCCAACA ATGCAGGCGT CGACGGCATC
GGCCTCAGCC GGCTGCTTGA AACCCGCCAA ATCAAGAAGA TGATCTCGTC CTATGTGGGC
GAGAACAAGC TGTTCGCGCA GCAGTTTCTG GCCGGCGAGC TGGAATTGGA ATTCGCCCCG
CAGGGCACCC TGGCCGAGCG GATCCGCGCC GGCGGCGCCG GCATTCCGGC GTTCTTCACC
AAGACCGGCG TCGGCACGCT GGTGGCGGAA GGCAAGGAAA TCCGCGAGTT CGACGGCGAG
AAATACGTGA TGGAGCGCGG CCTGTTCGGC GATATCGCGA TCGTCCACGC CTGGAAGGGC
GATACCGCCG GCAACCTCGT GTACCGAAAG ACCGCGCGCA ACTTCAATCC GATGATGGCC
ACCGCGGCGA AGATCACCAT CGCCGAGGTC GAGCATCTGG TGCCGGCGGG CGAGATCGAC
CCGGATCATA TCCACACCCC GGGCATCTTC GTGCAGCGCA TCGTCCACGT GCCGAACGCG
AAGAAACACA TCGAGCAGCG TACCACCCGC AAGCGTGCCG AATCGGCGGC GAGCTGA
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| Protein sequence | MNKVYPDAKA ALDGILRDGM MIMSGGFGLC GIPETLSDAI RDAGVKDLTF VSNNAGVDGI
GLSRLLETRQ IKKMISSYVG ENKLFAQQFL AGELELEFAP QGTLAERIRA GGAGIPAFFT
KTGVGTLVAE GKEIREFDGE KYVMERGLFG DIAIVHAWKG DTAGNLVYRK TARNFNPMMA
TAAKITIAEV EHLVPAGEID PDHIHTPGIF VQRIVHVPNA KKHIEQRTTR KRAESAAS
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