Gene Rpal_4616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_4616 
Symbol 
ID6412302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp4975413 
End bp4975844 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content62% 
IMG OID642714495 
Productphasin 
Protein accessionYP_001993582 
Protein GI192292977 
COG category[S] Function unknown 
COG ID[COG5490] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01841] phasin family protein
[TIGR01985] phasin 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGACT CGAGCGATCC GTTTTCCACC GTGCTGCCGT TCCAGCTTCC GGAGCAGGTC 
CGTGCCTTCG CCGAAAAGGG CGTGTCGCAG GCCCGCGAAA GCTACGCCAA GCTGAAGGAC
GTCGCCGAGA CCCAGAACGG CACGATCGAG GCGGTGTTCA CCTCGGCCAG CAAGGGCGCG
ACCGACTATT CGACCAAGGT GTTCGACTTC GTGAAGACCA ACACCAGCGC CAGCTTTGAC
TTCGCGCAGA ACCTGATCGG TGCCAAGACC CTGCCGGACG TGATGGAATT GTGGACTTCC
CACGCCAAGA AGCAGATCGA GACGCTGACC GCGCAGACCA AAGAACTGAC CGAGCTGACC
CAGAAGGTCG CCGCCGAGAC GGTCGAGCCG ATCAAGGCCA ACGCTTCGAA GATCTTCAAG
CCGGCCGCCT GA
 
Protein sequence
MADSSDPFST VLPFQLPEQV RAFAEKGVSQ ARESYAKLKD VAETQNGTIE AVFTSASKGA 
TDYSTKVFDF VKTNTSASFD FAQNLIGAKT LPDVMELWTS HAKKQIETLT AQTKELTELT
QKVAAETVEP IKANASKIFK PAA