Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_4616 |
Symbol | |
ID | 6412302 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 4975413 |
End bp | 4975844 |
Gene Length | 432 bp |
Protein Length | 143 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642714495 |
Product | phasin |
Protein accession | YP_001993582 |
Protein GI | 192292977 |
COG category | [S] Function unknown |
COG ID | [COG5490] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01841] phasin family protein [TIGR01985] phasin |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCCGACT CGAGCGATCC GTTTTCCACC GTGCTGCCGT TCCAGCTTCC GGAGCAGGTC CGTGCCTTCG CCGAAAAGGG CGTGTCGCAG GCCCGCGAAA GCTACGCCAA GCTGAAGGAC GTCGCCGAGA CCCAGAACGG CACGATCGAG GCGGTGTTCA CCTCGGCCAG CAAGGGCGCG ACCGACTATT CGACCAAGGT GTTCGACTTC GTGAAGACCA ACACCAGCGC CAGCTTTGAC TTCGCGCAGA ACCTGATCGG TGCCAAGACC CTGCCGGACG TGATGGAATT GTGGACTTCC CACGCCAAGA AGCAGATCGA GACGCTGACC GCGCAGACCA AAGAACTGAC CGAGCTGACC CAGAAGGTCG CCGCCGAGAC GGTCGAGCCG ATCAAGGCCA ACGCTTCGAA GATCTTCAAG CCGGCCGCCT GA
|
Protein sequence | MADSSDPFST VLPFQLPEQV RAFAEKGVSQ ARESYAKLKD VAETQNGTIE AVFTSASKGA TDYSTKVFDF VKTNTSASFD FAQNLIGAKT LPDVMELWTS HAKKQIETLT AQTKELTELT QKVAAETVEP IKANASKIFK PAA
|
| |