| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4589 |
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| Symbol | |
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| ID | 6412273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 4947141 |
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| End bp | 4947983 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642714469 |
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| Product | ABC-2 type transporter |
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| Protein accession | YP_001993558 |
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| Protein GI | 192292953 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.228945 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTTAGCCG CCCGATCCCT GCTCGCTCCC TGGTGGACAT CGAGCGTCGC CCTGCTGCGG
AGCATCGTCC GCAATCGCCG GCTCACGATC GAGCTGTCGA AGCGCGAACT GCTCGACCGC
TATACGGGCC AGCTGTTCGG ATCGGCATGG GCGATCCTGC ATCCCGCACT CACCGTGCTG
GTGTTCTTGT TCTTCTTCGG CGAGGTGCTG AAGGTCAAGG TCGGCGGCGC GCACCTGCCC
GCCAACAACG ATTTCACCAT CTATCTGCTG TCCGGACTGC TGCCGTGGCT GGTGCTGCAG
GACGTGCTGA CTCGCGGCTC GACGCTGGTC GTCAACAACG CCCACCTCGT CAAACAGGTA
GCGTTTCCTC TCGACGTGCT GCCGATCAAG GCGATCCCGC CGGCTTTCGT CATCCTGCTG
GTCGGACTGT TACTGCTGAT CGTCTACACG CTGATGACCA CCTTTGCCCT GCCCGCGACC
TATCTGGTTC TGCCGTTGCT GCTGGCGGAA TTGATCTTGC TTTGCGTCGG CATCGCATTG
TTTCTGTCGG CGCTCGGCGT CTTCATCCGC GACCTGAAGG ACATCGTCCA GGTGTTCAGT
TTCGTGGGCG TCTACGTCTC GCCGATCTTC TACACCATCG ATACCGTGCC CGCGAAGCTG
CGGGCTCTGG TTTTTCTCAA TCCGTTTACC CCGATCATCC TGACGTTCCA GGATGTGCTG
TTCTACGGGA GCTTCGCTCA TCCCTGGGCA TGGGTGGTTT CGATCGTCCT ATCCGTGGCA
GCGTTGCTAA TCGGAGCCCG AGTTTTCAAC ACCACTCAGC ATTACTTCGG TAGCTACCTG
TGA
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| Protein sequence | MLAARSLLAP WWTSSVALLR SIVRNRRLTI ELSKRELLDR YTGQLFGSAW AILHPALTVL
VFLFFFGEVL KVKVGGAHLP ANNDFTIYLL SGLLPWLVLQ DVLTRGSTLV VNNAHLVKQV
AFPLDVLPIK AIPPAFVILL VGLLLLIVYT LMTTFALPAT YLVLPLLLAE LILLCVGIAL
FLSALGVFIR DLKDIVQVFS FVGVYVSPIF YTIDTVPAKL RALVFLNPFT PIILTFQDVL
FYGSFAHPWA WVVSIVLSVA ALLIGARVFN TTQHYFGSYL
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