Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_4565 |
Symbol | |
ID | 6412249 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 4916904 |
End bp | 4917851 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642714445 |
Product | inner-membrane translocator |
Protein accession | YP_001993534 |
Protein GI | 192292929 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0477928 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCGAGC TGATCGTCAT TTCCACCCTC AATGGCGTTC TGTACGGAAT GCTGCTGTTC TTGATGGCGA GCGGGCTCAC CGTCATCTTC AGCATGCTCG GCGTGCTGAA CTTCGCTCAT GCCAGCTTCT ATATGCTCGG CGCCTTCTTC GGCTATCAGA TCAGCCGCTG GACAGGGTTC TGGCCGGCGC TGCTGATCGC GCCGCTGCTC GCCGGCGCGA TCGGAGCCGC GGTCGAACGG TTCGGCCTGC GCCGCGTCCA CCGCAACGGC CATGTCGCCG AACTGCTGTT CACCTTCGGG CTCGCCTTCG CGATCGAAGA AGTGGTGTCT ATCATCTGGG GCAAGGTTCC GGTCGATTAC CGCACCCCGG CTCTGCTCGA CTTCCCGGCA TTCACGATCT TCTCCACCAA CTACCCCGCC TACAAGATGT TCATGCTGGC AGTGTCGGTG GTGATCTTCG TCGGCCTCCT GGTGGTGCTG AAGAAGACCC GGATCGGCCT CATCGTTCAG GCGGCGCTGA CCCACCCACA CATGGTCGCG CATCTCGGCC ATAACGTCGA ACGGATCTTC ATGCTGGTGT TCGGCGTCGG CACTGCGCTG GCCGCCGTTG CCGGCGTGAT CGCGGGCCCG TCGCTGGTGA CGCAGTCCAA CATGGCTTCG CTGCTCGGGC CGATCCTGTT CGTCGTCGTG GTGGTCGGCG GCCTCGGCTC GCTGCCCGGC GCCTTCATCG CCTCGCTGCT GATCGGGCTG CTGCAGACCT TCGCGGTGTC GATCAACGCT TCGCCCGCAA CGCTGTTCGG TCCGCTCGGT CCCGATCTCG CCGCCTCCTG GCTCAACGAC ATCTGGAACG TGACCATCGC TCAGATCGCA CCGATCATGC CGTATCTGCT GCTCGTGCTT ATCCTGATCT TCCGGCCGAT GGGGCTGTTG GGAACCCGCG AAACATGA
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Protein sequence | MLELIVISTL NGVLYGMLLF LMASGLTVIF SMLGVLNFAH ASFYMLGAFF GYQISRWTGF WPALLIAPLL AGAIGAAVER FGLRRVHRNG HVAELLFTFG LAFAIEEVVS IIWGKVPVDY RTPALLDFPA FTIFSTNYPA YKMFMLAVSV VIFVGLLVVL KKTRIGLIVQ AALTHPHMVA HLGHNVERIF MLVFGVGTAL AAVAGVIAGP SLVTQSNMAS LLGPILFVVV VVGGLGSLPG AFIASLLIGL LQTFAVSINA SPATLFGPLG PDLAASWLND IWNVTIAQIA PIMPYLLLVL ILIFRPMGLL GTRET
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