| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4514 |
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| Symbol | |
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| ID | 6412198 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 4860072 |
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| End bp | 4861874 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642714396 |
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| Product | ABC transporter related |
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| Protein accession | YP_001993485 |
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| Protein GI | 192292880 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.350646 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGAAG CCCCACGCAA GATTACTGAC GACCCGTATG GCGCGTGGCA CCTCATCCGC
CGCCTGGTGA TGGAACAGGC GTCCGCCTAT TGGCGGCGCT ACGCGCTCGC CTTCGGCCTG
ATGGCGATCG CTGCCGCGGC GACCTCCGGC TCGGCCTTTC TGCTCGGCAA GGTGATCAAC
CAGGCCTATG TCGACCGCGA CCTCCAGGGC ATCATGTTCT GGTCGGTCGT CACCCTTGTG
GTGTTCAGCC TGAAGGGCGC AGCGACCTAC GGCCAGTCGG TGATCCTCAC CCAGATCAAG
AACGCGATCC TGGCCAACAA TCAGCGCCGG ATGTTCCACA AGCTGATGAG CGAGAGCATC
GGCTTCTTCT CGCAGCGGCA TTCATCCGAG TTCCTCGCGC GCCTCACCGC CGGCGCCAAC
TCCGTCACCG AAGTGCTCAA CCTGCTGATC AATGCGATCG GCCGCGATCT GTTGTCGCTG
ATCGGCCTGG TCATCGTGAT GGTGGTGCAG GATCCGTTCA TGGCGCTGTT CGGCCTTCTG
GTCGCGCCGC CGGCCGCGTT CGTGGTGCGT AAGCTGGTGA AGCGCGTGAA GGGCCTGGCG
CTGACGCAGT TCACCGGCAA CGCGCAGATC CTTGAGACCA TGCAGGAATC GCTGCAAGGC
ATCCGGACCG TGAAGGCGTT CTCGCTCGAA AAGACCATGA GCGACCGGAT CGACGCCAAC
ATCGCCGCGG TGCAGGCCAA CGCCGACAAG ATGGCGAAGG TGTCGAACCG CTCCAGCCCG
CTGATGGAAA CGCTCGGCGG CTTCGCGGTG GCGGCGTCGC TGATGTATGG CGGCTACCGC
GTGGTCGCGA CCGGCGCGAC GCCCGGCGAG TTCTTCTCGT TCCTGACCGC GTTCCTGCTC
GCCTATGAAC CGGCGAAGCG GCTGGCGCGG CTCAACATCG AACTCAACAG CGGCCTGGTT
GGCGCGCGGA TGCTGCTCGA GATCATCGAC AGCCCACCGA GCGAGCCGGA CGACAGCCAC
AAGCCGGCGC TGCAACTCAC CGAGGCGCGG GTCGAATTCG ACCATGTCTC GTTCGCTTAT
CGGCCGGACG AGCCGGTGCT GAACGCCATG AGCTTCGTCG CCGAGCCCGG CAAGATGACC
GCGCTGGTCG GCCCTTCCGG CGGCGGCAAA TCGACGGTGC TGGCGCTGCT GCTGCGCTTG
TACGAAGTGC AGTCCGGCGA AATCCGCATC GACGGGCAGT CGACCTCGAC CGTGTCGCGC
GAGTCGCTGC GGCGGCAGAC CGCCTATGTC GGCCAGGACG TCTATCTGTT CCGCGACACC
GTCCGCGCCA ACATCGCGTT CGGCAAGCTC GGCGCCACCG AGGACGAGAT CGTCGCCGCC
GCCAAGGCCG CCTGCGCACA CGACTTCATC ATGAGCTTCC CGCTCGGTTA CGACACTCCG
GTCGGCGAGC ACGGCGCGCA ACTGTCCGGC GGCCAGCGCC AGCGCATCGC GGTCGCCCGC
GCGCTGCTGC GCGATGCCCC GATCGTGCTG CTCGACGAAG CCACCGCCGC GCTCGACTCC
GAGTCGGAGA AGTTGGTGCA GGAGGCAATC GATCGTCTTG CCCGCGGCCG CACCACCATC
GTGATCGCCC ACCGGCTGCA CACCATCATG CATGCCGATT CCATCCTGGT GGTCGAAGCC
GGCGAGATCG TCGAGCAGGG CCGCCACGAC GACCTGCTGC GCCGCAGCGG CCGCTATGCC
TCGTTCTTCC GGCTGCAGCA GCGGCATGCC GCGCCGCTGG CGCCGGCCGA CGCCACCGCC
TAA
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| Protein sequence | MTEAPRKITD DPYGAWHLIR RLVMEQASAY WRRYALAFGL MAIAAAATSG SAFLLGKVIN
QAYVDRDLQG IMFWSVVTLV VFSLKGAATY GQSVILTQIK NAILANNQRR MFHKLMSESI
GFFSQRHSSE FLARLTAGAN SVTEVLNLLI NAIGRDLLSL IGLVIVMVVQ DPFMALFGLL
VAPPAAFVVR KLVKRVKGLA LTQFTGNAQI LETMQESLQG IRTVKAFSLE KTMSDRIDAN
IAAVQANADK MAKVSNRSSP LMETLGGFAV AASLMYGGYR VVATGATPGE FFSFLTAFLL
AYEPAKRLAR LNIELNSGLV GARMLLEIID SPPSEPDDSH KPALQLTEAR VEFDHVSFAY
RPDEPVLNAM SFVAEPGKMT ALVGPSGGGK STVLALLLRL YEVQSGEIRI DGQSTSTVSR
ESLRRQTAYV GQDVYLFRDT VRANIAFGKL GATEDEIVAA AKAACAHDFI MSFPLGYDTP
VGEHGAQLSG GQRQRIAVAR ALLRDAPIVL LDEATAALDS ESEKLVQEAI DRLARGRTTI
VIAHRLHTIM HADSILVVEA GEIVEQGRHD DLLRRSGRYA SFFRLQQRHA APLAPADATA
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