| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4473 |
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| Symbol | |
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| ID | 6412157 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 4810611 |
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| End bp | 4811594 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642714355 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001993444 |
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| Protein GI | 192292839 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0524075 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGGCTT CGGCGCGGCC GTTACGGATT CTCATCACTG GAGCGACCGG CTTCGTCGGT
CTGCATTCGG CCGCTGCAAT CCGTCGAACG TTTGGCGCTG GCACCGAAAT CATTCCAACC
GCACTTTATG CCGGCAAAGA TCCGGCTCTC GGCGAGGTAA TGGCTCTCGA TGTCACCGAT
CCGAGCGCTG TCGCCACGAT GATTGCCAAG CTTCAACCGA GCCACGTCGT CAATCTCGCG
GCGCTTGCCG CGCCCTCTGC GGCCAATGCG GACCCGTCGG CGAGCTGGCG TGTGCATCTC
GACGGTCCGC GCAACATCGG GCGCGCAATC CTGCAAGCAG CTCCGGCCTG TGTACTGCTG
CATGTCGGTT CGGGCCTCGC CTACGGAAAG AACCGTCCAC CGATCTGTCC GACCAGCGAG
GACAGGGTGC TCGCGCCCAT CGACGAGTAT GGTGCTTCAA AGGCCGCAGC TGACGTGGCG
CTCGGCCCGC TGATCGCCAA GGGACTGCAC TGCATCCGGT TGCGGCCGTT CAATCACACC
GGCCCGGGCC AGACTGACGC GTTCGTCGTT CCAGCATTCG CCCGCCAGAT CGCGCGGATC
GAGGCCGGCC TTGCGCCGCC GCAGATGCAG GTTGGCAACC TCGATGGTCA GCGTGACTTT
CTCGACGTGC GTGACGTGGT CGCCGCCTAT GCGGAAACGA TCGCCCGCAG CGACAGCCTC
GCGCCCGACA CGATTCTCAA CATCGCCTCA GGCGTGCCGC GCCGGATCGG CGACATGCTG
CAGCAATTGC TGACAATGGC ACGTGTCCCG ATCGCCGTGC GGAACGATCC GGCACGAGGT
AAGAGTGACG CCGCCGATGT CATCCTCGGC GATGCAAGCC GAGCACGATC GATGCTTAAC
TGGAAGCCGA CCATCGCATT CGAGCAAACC CTTGCTGACG TGCTCGAGGA CCAAAGATCC
GAGGTCGCAA AGATCGCAAA GTAA
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| Protein sequence | MAASARPLRI LITGATGFVG LHSAAAIRRT FGAGTEIIPT ALYAGKDPAL GEVMALDVTD
PSAVATMIAK LQPSHVVNLA ALAAPSAANA DPSASWRVHL DGPRNIGRAI LQAAPACVLL
HVGSGLAYGK NRPPICPTSE DRVLAPIDEY GASKAAADVA LGPLIAKGLH CIRLRPFNHT
GPGQTDAFVV PAFARQIARI EAGLAPPQMQ VGNLDGQRDF LDVRDVVAAY AETIARSDSL
APDTILNIAS GVPRRIGDML QQLLTMARVP IAVRNDPARG KSDAADVILG DASRARSMLN
WKPTIAFEQT LADVLEDQRS EVAKIAK
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