Gene Rpal_4468 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_4468 
Symbol 
ID6412152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand- 
Start bp4804995 
End bp4805651 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content66% 
IMG OID642714350 
Producthypothetical protein 
Protein accessionYP_001993439 
Protein GI192292834 
COG category[S] Function unknown 
COG ID[COG4731] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCACAC ATCGACCGAT CCGATTAGTC GCGCGGGCTG CTGTAGCGGC TTTCGCGCTG 
TTGCTATCCG CGGCCGCCCC ATCGGTCGCC GCGGAACCGA CCGCGGCCGG CCTTTGGCAA 
CGCACGGACA CCGGCAAGCC CGGCGGCAAG CCGGTGGTCT GGGTGCTGAT GCTCGATCGC 
GGCAACAACA TGTATGAAGG CATCGTCGCC AAGAGCTTTC CGCAGGCCGG ACAGCCCAAC 
CTGACGATCT GCGAAGAGTG TGAGGACGAT CGAAAGAACC AGCCGATCCT CGGCATCTCG 
TTGATCCGGG ATATGAAGCG GAAGGGACGT GTCTATGAGA ACGGCAACAT CCTTGATCCG 
CGCAATGGCG ACGTGTGGAA GGCGATGCTG ACGGTTAGCC CCGATGGCCA GACCCTGACG 
CTGCGCGGCT ATCTCATGAC CCCGGCGCTC GGCAAGGACG AGGACTGGTT CCGGCTGCCC 
GACACCGCGA TCTCCCAACT CGATCCGGAA ATCGTTACCA AGTTCATGCC CGAGCAGGCC 
GCGATGCAGG CGGCGCAGGC CGGAAAGCCA GCGGCCGCCG CGCCGGGAAC CGCCGGCAAG 
GCTAAGGCTC CGCCGGCCCC CGCCCCGAAG GGCGGCGCGA TGGCGCCCGC GAAGTAG
 
Protein sequence
MITHRPIRLV ARAAVAAFAL LLSAAAPSVA AEPTAAGLWQ RTDTGKPGGK PVVWVLMLDR 
GNNMYEGIVA KSFPQAGQPN LTICEECEDD RKNQPILGIS LIRDMKRKGR VYENGNILDP 
RNGDVWKAML TVSPDGQTLT LRGYLMTPAL GKDEDWFRLP DTAISQLDPE IVTKFMPEQA 
AMQAAQAGKP AAAAPGTAGK AKAPPAPAPK GGAMAPAK