| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4452 |
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| Symbol | |
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| ID | 6412136 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4781174 |
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| End bp | 4783840 |
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| Gene Length | 2667 bp |
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| Protein Length | 888 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642714334 |
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| Product | flagellin |
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| Protein accession | YP_001993423 |
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| Protein GI | 192292818 |
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| COG category | [N] Cell motility |
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| COG ID | [COG1344] Flagellin and related hook-associated proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.438814 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGGTA TCGTTCTATC CAACGCCGTT CGCCAGAATC TTTCTTCGCT CCAGGCCACG
GCTGACTTGC TCGCCACCAC CCAAAGCCGC CTCTCGTCCG GCAAGAAGGT GAACACGGCG
CTCGATAATC CGACTAACTT CTTCACCGCC GCTTCGCTCG ACAGCCGCGC CAGCGACATC
AACAACCTCC TCGATGGCAT CGGCAACGGC GTGCAGATCC TGCAGGCCGC CAATACCGGC
ATCACCTCGC TGAACAAGCT GGTGGACAGC GCCAAGTCGA TCGCCAACCA GGCCCTGCAG
ACGACCTCCG GCTACGCCAC CAAGTCGAAC GTGTCGGCCA CCATCTCCGG CGCCACCGCT
GACGACCTGC GCGGCACCCA GAGCTACTCG AACGCGGTTG CCACCGGCAA CGTGATCTTC
GACGGCACCG CGGGTGGCAG CACCGCTGCG TCCGGCACCG ACACCCTCGG TGGCGCGATC
GTCAGCATCG CGGCGGGTAC GGCTGTGACC GCTCTCGGCG CCGCTGACAA CACCGCGCTC
GGCAGCGTTC TCAGCGTCGG CACCGCCGCC GCCACCGCGG GCGGCTCCAA CCTGATCAGC
GATCTCACCA ACGGTTCGAC CACCACGGCG ACCGGTCCGG CTGCGGGCGA CTCGATCACG
GTGAACGGCA AGACCATCAC CTTCACGACT GCCGGTGCCG CCAGCAAGGA CAGCAACGGC
AACTACACGA TCGGTCTCGA CCAGACCCTG ACCAAGCTGG CCAACACGAT CGACGATATC
AACGGCAACA CCGGCCATTC GTCGACCATC ACCGCCGGCA AGCTGGAACT GCACTCGGGC
ACCAACAGCC CGCTGACGAT CGGCGACAAC GCCGGCGGCG CCGTGCTGGC CAAGCTCGGC
CTGACCGCGC AGACCGTCGA CACCGCGGCT GCGACCGCCT CGGCCAACAT CTCGGCCACG
ACGCAGCTGT TCAACACCCA TGGTGGCCTC ACCACCGCGG CGATCGCGGA CGGCACCCAG
CTGACGGTCA ACGGCAAGAC CATTACGTTC AAGACCTCCG ACGCTCCGCA GGGCAATAAC
ATCCCGACGG GCACCGGTGT TCTCGGCCGT ATCGGCACCG ACGGCAACGG CAATTCGACG
ATCTATCTCG GCGACCAGAC CAAGTTCAGC AACGCGACCG TTGGTGACCT GCTGACCGCG
ATCGATCTGG CCAACGGCGT CAAGTCGGCG ACCATCTCGT CGGGTGTCGC AACGATCAGC
ACCAACTCCG GCCAGACTGC TTCGGACGTC ACCGGTGGTA TCACCACCAT CCGCAGCTCG
ACCGGCGCCG ACCTCAACGT CACCGGCTGG ACCGACCTGT TCAAGAACCT CGGTCTGACC
AGCGCTACCG GTACCGGTCC GCTGACCCTC ACCAAGCAGC GCACCACCAG CGGCACCACG
ATGGGCACGC TGATCGCGGA CGGCTCCACG CTGAACGTGA ACGGCAAGAC CATCACCTTC
AAGAACGCCG CTGTTCCGAC TGCGTCGTCG ACCCACCAGG GCATCTCCGG CAACGTCGAG
ACCGATGGCC AGGGCAATTC GACCGTGTAC CTGCAGAAGG GCACCATCGA TGACGTCCTG
AAGGCCATCG ACCTCGCCAC CGGCGTCCGC ACGGCTTCGC TGGGTGTCTC CGGTGCCACG
ATCTCGACTG CCAACGGCAC GGCCAACTCG TCGATCACGA GCGGCTCGCT GAAGCTGTCG
ACCGGACTTG CCTCCGACCT TAGCATCACC GGCACCGGCA ACGCGCTGGC TGCCCTCGGC
CTCACCGGCC CGAGCGGCAT CTCCACCTCG TTCACCTCGG CTCGTGGCGC TTCGGCCGGC
AGCCTGAACG GCAAGACGCT GACCTTCACC TCCTTCAACG GCGGTGCGGC CACCAACGTC
ACCTTCGGCG ACGGCACCAA CGGCACCGTC AAGTCGCTCG CTCAGCTGAA CGCTGCGCTG
GCGTCCAACA ACCTGACGGC GTCGATCGAC AACGCCTCCG GCAAGCTCAC GATCGCAGCG
TCGAACGACT ACGCCTCCCA CACTCTGGGT GGCTCGGACG GCGGTGTGAT CGGCGGTACC
CTGGCTTCGA CCCTGACCTT CTCGGTGCCG AACGCGCCGG TGGTCGACGT CAACGCCCAG
ACCACCCGCG CCGGCCTGGT CAAGCAGTTC AACGACGTGC TCGACCAGAT CAAGACCACG
GCTCAGGACG CTTCGTTCAA CGGTGTGAAC CTGCTGAACG GCGACACCCT GAAGCTGGTG
TTCAACGAAA CCGGCAAGTC GACGATCTCG ATCCAGGGCG TCACCTTCAA CCCGACCGGC
CTTGGCCTGT CGAACCTGAG CTCTGGCGTC GACTTCATCG ACAACAACGC CACCAACGCC
GTGCTGAGCA AGCTGAGCAC CGCTTCGACC GCCCTGCGGT CGCAGGCCTC CGCGTTCGGT
TCGAACCTGT CGATCGTGCA GGCCCGTCAG GACTTCTCGA AGAGCCTGAT CAACGTGCTG
CAGACCGGTT CGTCGAACCT CACGCTGGCC GACACCAACG AGGAAGCGGC GAACAGCCAG
GCGCTGACGA CCCGCCAGTC GATCGCGGTG TCCGCGCTGT CGCTGGCCAA CCAGTCTCAG
CAGGGCGTGC TGCAGCTCCT CCGCTAA
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| Protein sequence | MSGIVLSNAV RQNLSSLQAT ADLLATTQSR LSSGKKVNTA LDNPTNFFTA ASLDSRASDI
NNLLDGIGNG VQILQAANTG ITSLNKLVDS AKSIANQALQ TTSGYATKSN VSATISGATA
DDLRGTQSYS NAVATGNVIF DGTAGGSTAA SGTDTLGGAI VSIAAGTAVT ALGAADNTAL
GSVLSVGTAA ATAGGSNLIS DLTNGSTTTA TGPAAGDSIT VNGKTITFTT AGAASKDSNG
NYTIGLDQTL TKLANTIDDI NGNTGHSSTI TAGKLELHSG TNSPLTIGDN AGGAVLAKLG
LTAQTVDTAA ATASANISAT TQLFNTHGGL TTAAIADGTQ LTVNGKTITF KTSDAPQGNN
IPTGTGVLGR IGTDGNGNST IYLGDQTKFS NATVGDLLTA IDLANGVKSA TISSGVATIS
TNSGQTASDV TGGITTIRSS TGADLNVTGW TDLFKNLGLT SATGTGPLTL TKQRTTSGTT
MGTLIADGST LNVNGKTITF KNAAVPTASS THQGISGNVE TDGQGNSTVY LQKGTIDDVL
KAIDLATGVR TASLGVSGAT ISTANGTANS SITSGSLKLS TGLASDLSIT GTGNALAALG
LTGPSGISTS FTSARGASAG SLNGKTLTFT SFNGGAATNV TFGDGTNGTV KSLAQLNAAL
ASNNLTASID NASGKLTIAA SNDYASHTLG GSDGGVIGGT LASTLTFSVP NAPVVDVNAQ
TTRAGLVKQF NDVLDQIKTT AQDASFNGVN LLNGDTLKLV FNETGKSTIS IQGVTFNPTG
LGLSNLSSGV DFIDNNATNA VLSKLSTAST ALRSQASAFG SNLSIVQARQ DFSKSLINVL
QTGSSNLTLA DTNEEAANSQ ALTTRQSIAV SALSLANQSQ QGVLQLLR
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