Gene Rpal_4450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_4450 
Symbol 
ID6412134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand- 
Start bp4779307 
End bp4779975 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content65% 
IMG OID642714332 
Productsugar isomerase (SIS) 
Protein accessionYP_001993421 
Protein GI192292816 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0279] Phosphoheptose isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.570371 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCAGT CGCGTAACAG CACCGCCCCC ATTCCCGACG ACGTTCCTGA GGATGTCGCC 
GCGACGCCGC TGCTGTCGAA ACGGCAGATG CTCGGCTATT ACGACCACCT CCGGGCGACT 
CTCGCCGCCG CGCAGGCCTC CGATTGCGAA GGCCGGCCGT TCGCGCAGGA AGTCGCCGCC 
TCGCTGGTGA TCGCCTGGGC CCGCGAAGTC CATGCCGACG GTCGCAAGCT GATGTTCATC 
GGCAATGGCG GCAGCGCTGC GATCGCCAGC CACATGGCGA CCGACTATTC CAAGAACGGC 
GGCATGCGCG CGCTCTGCCT CAACGACGGT GCGATGCTGA CCTGCCTCGG CAACGACTAC 
GGCTACGAGC AGGTATTCGC CAAGCAGATC GAGCTGTTCG CGCAGGAAGG CGACCTGTTG 
ATCGCGATCT CCTCGTCCGG TCGCTCGCCG AACATCCTCA ACGCCGTCGC TGCTGCTCGT 
GCGCGCGGCT GCCGGGTGAT CACCTTAAGC GGTTTTTCGG CCGACAATCC GCTGCGCCGC 
GAGGGCGACA TCAATTTCTA TGTGGCCTCC GACCAATACG GTTTCGTCGA GCTCGGCCAT 
CTGACAATCT GCCATGCCAT TCTCGATTTC GCCTGCGGCC AGCGCGTGCC GCTGCCGGCC 
GCCGGCTGA
 
Protein sequence
MTQSRNSTAP IPDDVPEDVA ATPLLSKRQM LGYYDHLRAT LAAAQASDCE GRPFAQEVAA 
SLVIAWAREV HADGRKLMFI GNGGSAAIAS HMATDYSKNG GMRALCLNDG AMLTCLGNDY 
GYEQVFAKQI ELFAQEGDLL IAISSSGRSP NILNAVAAAR ARGCRVITLS GFSADNPLRR 
EGDINFYVAS DQYGFVELGH LTICHAILDF ACGQRVPLPA AG