| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4414 |
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| Symbol | |
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| ID | 6412098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4738670 |
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| End bp | 4742398 |
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| Gene Length | 3729 bp |
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| Protein Length | 1242 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642714296 |
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| Product | tetratricopeptide TPR_4 protein |
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| Protein accession | YP_001993385 |
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| Protein GI | 192292780 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.746828 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCGGA TGGCTGCCGC TGGAGTTTGG TCACAGGCGC TGGTCAGGCG CGTCGTACGA
CTCTGCCTTG CCGGCCTACT GCTGCTGATC GCGGCCGCGC TGACCGTTGC GCCCGCGGCC
GCGCAGGTCC GCGGCGAAGC CAGCTTCGAA GCGAAAGGCG GATACGGGCG GCTGCTGCTC
AAGATGGCCG AGGACGTCGA GTCCGACGTC GCCACAGCAG GCCTGATCGT GGTAATCCGC
TTCAAGCGAC CGATCGACAT TCCGGTCGAC AAGCTCGCCG ATTCCGCGCC CGGCTATATC
GGCTCGGCGC GTCTCGATCC GGACGGTTAT GCGCTGCGCT TGGCACTGAC GCGCAAGCTC
GCTGTCAATG CGATGGCGGC CGGAGAACGG CTGTTCGTCG ACCTGTTGCC GGAGAATTGG
ACGGGCGCGC CGCCGGGACT GCCGCAAGAC GTCGTCAAGG AACTGGCCGA ACGTGCCCGC
GCCGCCGAGC GCGCGCTGAA GGCCCAGCGT GCTACCGCCG AAGTGAAGAA GCGACCACCG
ATCCGGGTGC GGACCTCGGT GCAGCCGACC TTCGTGCGCT ACGTCTTCGA AGTGCCGTCC
GACGTGCGGG TGGCGTCGAC GCTGACCGAC CGCAAGCTGT CGGTGCAATT CAACACTCCG
CTGACCTTCG ACCTCGCCGA CGCGCAGCTC GCCTCGCCGC CGAGTGTCGC TTCGATCGCG
CAGAACATGG AAGGCGGCAA TTCCACCGTC GACTTCACGC TGATCGGCGG CGCTGATGTG
CATTCGTTCC GCGAAGAGAA GAACTTCATC ATCGATGTCG GGTTCCAGCC GGGCGGCGCC
GAGTCGGGCC AGACCATGGG GCCGCAGGCG CTGAAGCTGC CTGAGATCGG CAAGCTCGAT
CCGAAGGCGC TGCAGGCGGA GATCCAGAAG CAGGAACCCA AGGCTGAGAA CGGCCACAAG
CCAGACGCCA AGGATTCAGG CCACAAGGCA GACGCCAAGG AGGCCGATCA CAAGCCGGAG
GCCAAGCCCG CGCCGGCTCC GGTGGAAGCC AAGACCATGA AGCCGGCGAC ACCGGCCGGC
CCGCAGCCTG CACCTGCCGC TGCGCCGTCT CCGTCTGTGG CGGGCCCCTC GGCGACGCCG
TCGCCGGCCG GTCCGCCTGC CAAAGGTGGC GAAGTCGCTG CCGCGCCAGC AGGGCCTGCT
GCGCCCACCA TCGCACCGCC GCAGACCGCT CCGGCTGTGC CTCAGGCTCC CACGCCTCCG
CCCGCAGCAG CCGCGAAGCC AGTCTCGAAC GAGGGACGGC CGGTCGAAGT CCGAATGAAC
ACCGATGGGC TGCGCCTCAG CTTCGCATTT TCGGCTCCGA CGCCGGCGGC GCTGTTCCGG
CGCGGCGACG TGTTGTGGCT GGTCCTCGAC AACACCGCAG CGTTTGATCT GTCGGCCATC
CGCCGCGAGG GCAGTGCGGT GGTCAGCGAC GCCAGCCGCA TGCCGCTCGC CAACGGACAA
GCAATTCGCA TCCGGCTCAG CCGCCCGCAG ATCGCGACGC TCACTGAAGA CGACGGTGCG
GGCAAAGGCT GGACTGTGAC GCTTGCCGAC GCCGGCCGCG CGGCTTCGCA GCCGCTCTCC
GCGGTACGCA ACATTGCCGA TCCGACACGC GCCAGCGTTT CGGTGTCGTT GCCTGCGTTG
GGCCAAGTGC AAAAGCTGGC CGATCCCGAC GCCGGCGATA CGCTGACGGT GGTTACCGCG
CTGCCGCCGC CGCGCGGCTT CATCAAGCGG CAGAACTTCG TCGAGTTCAA TCTGCTGGAA
TCGATCCACG GCGTTGTTGT CGAGCTGAAG TCTGACGACG TCACCGTCGA GACCACCCCC
GACGCCGTTC TGCTGACGCG GCCTGGTGGT CTGACGCTGT CCTCCGCCGC AGAGACCGGC
GGTGATGCCG CGTCCGAGAA GCCGTTCTTC GATGTCCGGC AATGGGCCAA GGATCAGACT
GGCAGCTTCA AGGACATGCT CGACGAGCGT CTCAATGCCG CGTCGGTTGC CGGCGGCGAC
GACAAGCTGC CGGCGCGGCT TGATCTCGCG CGGTTCTACA TGGCGCGCGG CCTCTACCCC
GAGGCCAAGG GCGTGCTTGA TCTCGCGCTG TCCGCCATCA AGCCCGGCCA GGAAGATGCC
GCCACCATGC TCGGCCATGC GGCCGCGAGC GCGCTGATGC AGCGGCCGGA GCAGACGTTG
AAGGACGTCG CTAACCCGGC GATTGCTTCG ACCTACGACG CGCAGATGTG GAAGGGCGTG
GCGCTGGCGC GGCAAGGCAA ATGGGCCGAG GCGCGCGAGA AGCTGAAGAG CGTGCAGTTC
GCCATCACGG CGCTGCCGCT CGATATCCAG CGTGCAGTGC TCGCCGCGGC GATGCGGGCC
TCGCTCGAAG TGCGTGACTA TTCGGGCGCC GCCAAACTCA GCACCGATTT TGATCTGGTC
GGCATCCCGC CGGAGATCAA GCCGCAGGTC GCAGTGATGC GCGGCTGGCT CGACGAAGCG
CTGGGCCGCG AGCCGGAAGC GCTGAAGAAG TACAAGGACG CGATGGCTTC GTCCGACCGT
CAGGCCGCCG CCGAAGCGCG GTTTCGCGAG ATCGTGCTGC GGCTGAAGCG CGAAGAATTG
ACGCCTGCGG AAGCTCTGCC CGATCTGGAG CGACTGTCTG TGAACTGGCG CGGCGATCAG
CTCGAAGTGA ACACTCAGCA ACTGCTGACC AAGATGTACG CCGACGCCGG CCGCTATCAG
GATTCGCTGC AGGCGGCCCG GGTTGCGACC CAGCTTGCGC CGAATTCGGA AGCTGCCCGC
AAGGCGCAGG ACGATGCCCG CGCGCTGTTC GCGCAGATCT TCCTTGGAAG CAAGGGCGAC
GACTTGCCGC CGATCGAAGC GCTGGCGATG TTCTACGAGT ATCGCGAGCT GACGCCGATC
GGCCGGCGCG GCGACGAGAT GATCCGCCGG CTTGCCGACC GTTTGGTTGC CGTCGATCTG
CTCGATCAGG CCAGTGAGCT GTTGCAGTAC CAGGTTGACA AGCGTCTCGA AGGCGCGGCG
CGCGCGCAGG TCGCCGCCAA GCTGGCGATG ATCTACCTGA TGAACCGCAA ACCGGATCGC
GCCATCGGTG CGCTGCATTC CTCGCGCATC GCCGATCTCG CCGGTGAATT GCGTCAGCAG
CGGCTGTTAC TCGAGGCGCG TGCGCAGAGC GACATCGGCC GCCACGATCT GGCGCTCGAC
ATTATCAGCA ACATCAGTGG GCGCGAAGCG ATCCGGCTGC GCTCCGACAT CTACTGGGCG
GCGCGGCGCT GGCGCGAATC CTCCGAGCAG ATTGAACTGT ATCTCGGCGA CCGCTGGAAG
GACTTCACCC CGCTGTCGGC CGCCGAGAAG AGCGACGTGA TCCGCGCCGT AGTCGGCTAT
GCGCTGGCCG AAGACGCACT CGGCCTCGAT CGCTTCCGCG AGAAATTTGC GCCGCTGATG
ACCGATCCGG CCGATCGCGC GGCCTTCGAC ATTGCGAGCC AGCCGAGCGC CGGCAACAGC
GCTGCGTTTG CCGCGATCGC CAAGATGGCC GCCGGCGTCG ATACGCTCGA AGGCTTCCTG
CGCGAGATGA AGCAGCGCTT CCCCGACGCC AGCGCCCGCG CCAACCCGCC GCCGGGCGCC
GATCTCACCG CCACCGGCAC GCTGCCCCAG GTGCCGCCAA AGATCCGCGC CATTCAGGCG
ACGCGGTAG
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| Protein sequence | MARMAAAGVW SQALVRRVVR LCLAGLLLLI AAALTVAPAA AQVRGEASFE AKGGYGRLLL
KMAEDVESDV ATAGLIVVIR FKRPIDIPVD KLADSAPGYI GSARLDPDGY ALRLALTRKL
AVNAMAAGER LFVDLLPENW TGAPPGLPQD VVKELAERAR AAERALKAQR ATAEVKKRPP
IRVRTSVQPT FVRYVFEVPS DVRVASTLTD RKLSVQFNTP LTFDLADAQL ASPPSVASIA
QNMEGGNSTV DFTLIGGADV HSFREEKNFI IDVGFQPGGA ESGQTMGPQA LKLPEIGKLD
PKALQAEIQK QEPKAENGHK PDAKDSGHKA DAKEADHKPE AKPAPAPVEA KTMKPATPAG
PQPAPAAAPS PSVAGPSATP SPAGPPAKGG EVAAAPAGPA APTIAPPQTA PAVPQAPTPP
PAAAAKPVSN EGRPVEVRMN TDGLRLSFAF SAPTPAALFR RGDVLWLVLD NTAAFDLSAI
RREGSAVVSD ASRMPLANGQ AIRIRLSRPQ IATLTEDDGA GKGWTVTLAD AGRAASQPLS
AVRNIADPTR ASVSVSLPAL GQVQKLADPD AGDTLTVVTA LPPPRGFIKR QNFVEFNLLE
SIHGVVVELK SDDVTVETTP DAVLLTRPGG LTLSSAAETG GDAASEKPFF DVRQWAKDQT
GSFKDMLDER LNAASVAGGD DKLPARLDLA RFYMARGLYP EAKGVLDLAL SAIKPGQEDA
ATMLGHAAAS ALMQRPEQTL KDVANPAIAS TYDAQMWKGV ALARQGKWAE AREKLKSVQF
AITALPLDIQ RAVLAAAMRA SLEVRDYSGA AKLSTDFDLV GIPPEIKPQV AVMRGWLDEA
LGREPEALKK YKDAMASSDR QAAAEARFRE IVLRLKREEL TPAEALPDLE RLSVNWRGDQ
LEVNTQQLLT KMYADAGRYQ DSLQAARVAT QLAPNSEAAR KAQDDARALF AQIFLGSKGD
DLPPIEALAM FYEYRELTPI GRRGDEMIRR LADRLVAVDL LDQASELLQY QVDKRLEGAA
RAQVAAKLAM IYLMNRKPDR AIGALHSSRI ADLAGELRQQ RLLLEARAQS DIGRHDLALD
IISNISGREA IRLRSDIYWA ARRWRESSEQ IELYLGDRWK DFTPLSAAEK SDVIRAVVGY
ALAEDALGLD RFREKFAPLM TDPADRAAFD IASQPSAGNS AAFAAIAKMA AGVDTLEGFL
REMKQRFPDA SARANPPPGA DLTATGTLPQ VPPKIRAIQA TR
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