Gene Rpal_4386 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_4386 
Symbol 
ID6412070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp4714485 
End bp4714946 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content70% 
IMG OID642714268 
Productthioesterase superfamily protein 
Protein accessionYP_001993357 
Protein GI192292752 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.126093 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGAGC AGCAGGCGGC GGAGTACGGG CTCCAGGAGG CGCGGCAGAT GCTGCAGGAG 
GCATTCGCGC CCTGGGTGCT GGACCTCGGC CTGTCGATCG AAGCCCTCGA GCTCGATCCG
CCTGCCGGCA GCCCGCCCGA CTGGCAGCCC GGCGCGACTT TGCGGATGGC GTTCTCCGAG
CGGCTGTGCC GCAGCGGCGG CGTGATCTGC GGCCAGGCGC TGATGGCGCT GGCCGATACC
GCGATGGTGT TCGCGGTCTG CGCCGGCTAT CGCGGCTTCC GGCCGATGAC GACCGTCGAT
CAGACCACCC ATTTTCTCAA AGCCGTCGCC TCGACCGACG TGATCGCCGA CGCCCGCCTG
GTCCGGCTCG GCCGCACCAT GAGCTTCGGA CGGGTGACGC TGCTCGGCGC CTCCGACCGC
AAGCCGGTGG CAATGGTGTC GAGCGCGTTT GCGATGCTGT GA
 
Protein sequence
MAEQQAAEYG LQEARQMLQE AFAPWVLDLG LSIEALELDP PAGSPPDWQP GATLRMAFSE 
RLCRSGGVIC GQALMALADT AMVFAVCAGY RGFRPMTTVD QTTHFLKAVA STDVIADARL
VRLGRTMSFG RVTLLGASDR KPVAMVSSAF AML