| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4370 |
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| Symbol | |
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| ID | 6412054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 4696164 |
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| End bp | 4698122 |
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| Gene Length | 1959 bp |
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| Protein Length | 652 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642714252 |
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| Product | protein of unknown function UPF0118 |
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| Protein accession | YP_001993341 |
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| Protein GI | 192292736 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0628] Predicted permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCTGG GCAAAGCCCA ATCCCTGGAA GACGTCGCCG GTCTGGTCGG CGCCTGCGCG
GTCACGATCC TGGCCGTCAT CATCATCTCG GCGCTGTATG TCGGCCGAGA GGTGTTCGTC
CCGGTCGCCC TGGCGATCCT GCTGAGCTTC GTGCTGGCTC GCCCGGTCAA CTTCCTGCAG
TCACTGCGGG TGCCGCGGGC AATCGCGGCG ATCACCACCG TCCTTTTCGC CTTCGCGGTG
ATCTTCGCGC TCGGCAGCCT GATCGCGACG CAGCTGTCGC GGCTGGCCGA CGACCTGCCG
CAGTACCAAT CGACGATCCA ATCCAAGATC ACCTCGCTGC GCGGCGTGAC CGGCGGCTCC
ACGACGCTCG AACGCGCCGA GGGGATGCTG CAGAATCTCA GCAAGGAACT GAACAAACCG
AAGAACGCGC CCGCGCCGTC GCTGAGCAAT CCGCCGACGA CGTCGTCGAG ACCGGTCACC
CCCGTTCCGG TCGAAGTCCT GCAGCCCGAC CCGGGGACCT TGGCGAACCT GCGATCTCTG
ATCGCGCCGC TGATCTCGCC GCTGGCGACG ACCGGCATCA TCGTGATCTT CGTCATCTTC
ATCCTGTTGC AGCGGGAGGA CCTGCGCAAT CGGCTGATCC GGCTCGCCGG CACCCGCGAT
CTGCAGCGCA CGACCGCGGC GCTGGATGAT GCCGCCAGCC GGCTGAGCCG CTTGTTCCTC
AATCAGCTGC TGATCAACTC CGGCTTCGGC GTGCTGATCG GCACCGGGTT GTGGATCATC
GGCGTGCCGA GCCCGGCGCT GTGGGGCATT CTCGCCGCGG TGCTGCGCTT CGTGCCGTAT
ATCGGATCGA TCATCTCAGC GGCCTTCCCA CTGACCCTGG CGGTCGCGGT CGATCCCGGC
TGGTCGATGC TGGTGTGGAC GGCGATCCTG TTCTTCGTGA TCGAACCGGC GATCGCCCAT
GTCGTCGAGC CGATGGTGTA CGGCCGTAGT ACCGGGCTGT CGCCGGTCGC CGTGGTGATC
TCGGCGACGT TCTGGACGGC GCTGTGGGGC CCGATCGGCC TCGTTCTCGC CACGCCGCTG
ACGGTGTGTC TCGTCGTGCT CGGGCGGCAC GTCGAGCGGT TGGCGTTTCT CGACGTAATG
TTCGGTGATC GGCCGGCGCT ATCGCCGCCG GAGATCTTCT ATCAGCGCAT GCTGGCCGGC
GACCCGGCCG AAGCCGCCGA GAAGGCCGAG CAATTTCTCA AAGAACGGTC GCTGTCGTCG
TATTACGACG ACGTCGCCCT GAAAGGCCTG CAACTAGCCC AGGCCGACCT CGATCGCGAC
GCACTCGACG CCGTGCGCCT GACGCGGATC AAGGAGACGG TGCAGGAGTT CACCGAGGAC
CTCACGGACG AAATCGATCA GGCGCCGGAC GGCGACGAAG CCACCACCGA CGCCGAGGCT
GCTGCCGCCG TCGAAGTGAC GCCGGTCGAT CACGCCGACG ACGACATCGC AGTGCTGAAG
CCCGCCGACC TCAAGCCTGG ATGGCAAGGC GCCGCACCGG TGATGTGCAT CGGCGGACGG
TCGCAATTGG ACGAAGCCGC GGCGCTGATG CTGGCGCATT TGTGCCGCGT GCACGGCATC
GGCGCCCGTG TCGAGCCATC GAGCGCGCTG TCCACCAAGA ACATCTTTGG CCTCGACGTC
TCGAACGTCG CGCTGATCTG CCTGTCGTAT CTCGAGGCGT CGAACACGAC CCATATCCGC
TACGCCGTCC GCCGCCTGCG TCGCAAGGCG CCGCACGCCA AGATCATCGT CGCTTTGTGG
TCGGCGGAGA CTCCGCAACT GGCCGATACC AACGAATCCG CGCAGGCCGA CGCGACGGTG
CTGACGCTGC GGGACGCCGT GAAATACTGC GTCGAAGAGG CGATCATTGA GCCGCCGCCA
CAGACGATCG AAATGCCGGT GATCAGCGAG GCTGTGTAG
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| Protein sequence | MKLGKAQSLE DVAGLVGACA VTILAVIIIS ALYVGREVFV PVALAILLSF VLARPVNFLQ
SLRVPRAIAA ITTVLFAFAV IFALGSLIAT QLSRLADDLP QYQSTIQSKI TSLRGVTGGS
TTLERAEGML QNLSKELNKP KNAPAPSLSN PPTTSSRPVT PVPVEVLQPD PGTLANLRSL
IAPLISPLAT TGIIVIFVIF ILLQREDLRN RLIRLAGTRD LQRTTAALDD AASRLSRLFL
NQLLINSGFG VLIGTGLWII GVPSPALWGI LAAVLRFVPY IGSIISAAFP LTLAVAVDPG
WSMLVWTAIL FFVIEPAIAH VVEPMVYGRS TGLSPVAVVI SATFWTALWG PIGLVLATPL
TVCLVVLGRH VERLAFLDVM FGDRPALSPP EIFYQRMLAG DPAEAAEKAE QFLKERSLSS
YYDDVALKGL QLAQADLDRD ALDAVRLTRI KETVQEFTED LTDEIDQAPD GDEATTDAEA
AAAVEVTPVD HADDDIAVLK PADLKPGWQG AAPVMCIGGR SQLDEAAALM LAHLCRVHGI
GARVEPSSAL STKNIFGLDV SNVALICLSY LEASNTTHIR YAVRRLRRKA PHAKIIVALW
SAETPQLADT NESAQADATV LTLRDAVKYC VEEAIIEPPP QTIEMPVISE AV
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