Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_4350 |
Symbol | |
ID | 6412034 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 4676145 |
End bp | 4676495 |
Gene Length | 351 bp |
Protein Length | 116 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642714232 |
Product | transcriptional regulator |
Protein accession | YP_001993321 |
Protein GI | 192292716 |
COG category | [S] Function unknown |
COG ID | [COG5606] Uncharacterized conserved small protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.149583 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGAGAA CGACCGCTAG CAAAGGCACG GCAGCCGAGA TCACCCGCGG CAGCGGCAAT GTGTTTGCGG ACCTGGGCAT GCCCGATGCG GAGGAGAGGC AGACCAAGCT CAGGCTCGCC TACGCTTTGA ACGTGGTGAT CGACCGCGCT CGCCTGAGCC AAGCCGCCGC TGCCGCGCGG CTCGGGATCA ACCAGCCCAA GGTTTCGGCC CTGCGCAACT ACAAACTGGA AGGCTTTTCG GTCGAGCGGC TGATGACGTT GCTCAACGCG CTCGATCAGG ACATCGAAAT TATCATCCGC AAAAAGCCAC GCTCGCGCGC GGCGGCGCGG ATCAGCGTAG TGGCGGCGTG A
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Protein sequence | MARTTASKGT AAEITRGSGN VFADLGMPDA EERQTKLRLA YALNVVIDRA RLSQAAAAAR LGINQPKVSA LRNYKLEGFS VERLMTLLNA LDQDIEIIIR KKPRSRAAAR ISVVAA
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